Variant report

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs1558002	0.95[GIH][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519090	chr7:70085934-71071896	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1015261	chr7:70404302-71255933	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1033155	chr7:70712368-70757929	Enhancers Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:70732400-70755400	Weak transcription	Right Atrium	heart
2	chr7:70733200-70747000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr7:70735200-70747000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr7:70736400-70747200	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr7:70739600-70745800	Weak transcription	Right Ventricle	heart
6	chr7:70739800-70750600	Weak transcription	Fetal Muscle Leg	muscle
7	chr7:70740000-70751600	Weak transcription	Left Ventricle	heart
8	chr7:70741200-70750600	Weak transcription	Ovary	ovary
9	chr7:70742600-70747000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr7:70743600-70750200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr7:70744000-70747000	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr7:70744800-70746800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr7:70745000-70746400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr7:70745200-70746000	Enhancers	H9 Cell Line	embryonic stem cell
15	chr7:70745200-70746600	Enhancers	Breast Myoepithelial Primary Cells	Breast
16	chr7:70745400-70745800	Enhancers	Fetal Heart	heart
17	chr7:70745400-70746000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr7:70745400-70750600	Weak transcription	Pancreas	Pancrea
19	chr7:70745600-70745800	Enhancers	ES-I3 Cell Line	embryonic stem cell
20	chr7:70745600-70746200	Enhancers	Aorta	Aorta

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