Variant report

Variant rs1560884
Chromosome Location chr2:110373197-110373198
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:110369000-110373800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr2:110369400-110373200 Active TSS HSMM muscle
3 chr2:110369400-110374600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr2:110369600-110373800 Active TSS Aorta Aorta
5 chr2:110369600-110374000 Active TSS Hela-S3 cervix
6 chr2:110369800-110373400 Active TSS A549 lung
7 chr2:110369800-110374200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr2:110370000-110373800 Active TSS H9 Cell Line embryonic stem cell
9 chr2:110370000-110373800 Active TSS Pancreatic Islets Pancreatic Islet
10 chr2:110370000-110374000 Active TSS Fetal Kidney kidney
11 chr2:110370000-110374800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr2:110370000-110375000 Active TSS NHEK skin
13 chr2:110370200-110373800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr2:110370400-110373200 Active TSS Fetal Intestine Large intestine
15 chr2:110370400-110373400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr2:110370600-110373800 Active TSS HSMMtube muscle
17 chr2:110371200-110373400 ZNF genes & repeats Spleen Spleen
18 chr2:110371600-110373400 ZNF genes & repeats GM12878-XiMat blood
19 chr2:110371800-110373200 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr2:110371800-110373400 Bivalent Enhancer Primary T cells fromperipheralblood blood
21 chr2:110372000-110373400 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr2:110372000-110373600 Active TSS Stomach Mucosa stomach
23 chr2:110372000-110373800 Active TSS ES-WA7 Cell Line embryonic stem cell
24 chr2:110372200-110373600 Flanking Active TSS Pancreas Pancrea
25 chr2:110372200-110373800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
26 chr2:110372200-110373800 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
27 chr2:110372400-110373200 Bivalent/Poised TSS Primary hematopoietic stem cells short term culture blood
28 chr2:110372400-110373200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr2:110372400-110373400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
30 chr2:110372400-110373600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
31 chr2:110372400-110373600 Flanking Active TSS Lung lung
32 chr2:110372400-110373600 Flanking Active TSS Right Ventricle heart
33 chr2:110372400-110373800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
34 chr2:110372600-110373200 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
35 chr2:110372600-110373200 Flanking Active TSS Muscle Satellite Cultured Cells --
36 chr2:110372600-110373200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
37 chr2:110372600-110373200 Flanking Active TSS Brain Hippocampus Middle brain
38 chr2:110372600-110373200 Flanking Active TSS Gastric stomach
39 chr2:110372600-110373200 Flanking Active TSS Left Ventricle heart
40 chr2:110372600-110373200 Flanking Active TSS Placenta Amnion Placenta Amnion
41 chr2:110372600-110373200 Flanking Active TSS Right Atrium heart
42 chr2:110372600-110373400 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
43 chr2:110372600-110373400 Flanking Bivalent TSS/Enh ES-UCSF4 Cell Line embryonic stem cell
44 chr2:110372600-110373400 Flanking Bivalent TSS/Enh Primary monocytes fromperipheralblood blood
45 chr2:110372600-110373400 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
46 chr2:110372600-110373400 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
47 chr2:110372600-110373400 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
48 chr2:110372600-110373400 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
49 chr2:110372600-110373400 Flanking Active TSS Psoas Muscle Psoas
50 chr2:110372600-110373600 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell

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