Variant report

Variant rs1573088
Chromosome Location chr1:224643074-224643075
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224623200-224644400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:224623400-224644600 Weak transcription Right Ventricle heart
3 chr1:224623600-224644600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:224623600-224644600 Weak transcription Brain Substantia Nigra brain
5 chr1:224623800-224644400 Weak transcription Brain Anterior Caudate brain
6 chr1:224624000-224644000 Weak transcription Brain Hippocampus Middle brain
7 chr1:224624000-224644600 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr1:224624000-224644600 Weak transcription Brain Angular Gyrus brain
9 chr1:224624000-224645000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:224624000-224645000 Weak transcription Primary hematopoietic stem cells blood
11 chr1:224624000-224645000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:224624000-224646800 Weak transcription Primary B cells from peripheral blood blood
13 chr1:224624800-224644000 Weak transcription Pancreas Pancrea
14 chr1:224624800-224644400 Weak transcription A549 lung
15 chr1:224624800-224645000 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr1:224625200-224644600 Weak transcription GM12878-XiMat blood
17 chr1:224625200-224645000 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr1:224627000-224644000 Weak transcription Placenta Placenta
19 chr1:224627200-224644400 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr1:224628200-224645000 Weak transcription Thymus Thymus
21 chr1:224628400-224644600 Weak transcription Fetal Lung lung
22 chr1:224628400-224644800 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr1:224628400-224648800 Weak transcription Fetal Brain Female brain
24 chr1:224628600-224644200 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:224628600-224653600 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr1:224628800-224643800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:224629200-224644200 Weak transcription Brain Germinal Matrix brain
28 chr1:224629200-224644600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr1:224630800-224644600 Weak transcription Primary T cells fromperipheralblood blood
30 chr1:224631000-224644200 Weak transcription Fetal Muscle Trunk muscle
31 chr1:224631200-224644400 Weak transcription Brain Inferior Temporal Lobe brain
32 chr1:224635200-224643800 Weak transcription Lung lung
33 chr1:224635200-224644000 Weak transcription Ovary ovary
34 chr1:224635200-224644400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:224635200-224644400 Weak transcription Left Ventricle heart
36 chr1:224635200-224644600 Weak transcription Aorta Aorta
37 chr1:224635400-224644200 Weak transcription Adipose Nuclei Adipose
38 chr1:224635400-224644400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:224635400-224644400 Weak transcription HSMMtube muscle
40 chr1:224635400-224644400 Weak transcription NHLF lung
41 chr1:224635400-224644600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:224635600-224644400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:224635600-224644400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:224635600-224644400 Weak transcription HSMM muscle
45 chr1:224635600-224644400 Weak transcription NHDF-Ad bronchial
46 chr1:224635600-224644600 Weak transcription NH-A brain
47 chr1:224635800-224644400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr1:224635800-224644400 Weak transcription Psoas Muscle Psoas
49 chr1:224636000-224643800 Weak transcription Spleen Spleen
50 chr1:224636200-224644400 Weak transcription Duodenum Smooth Muscle Duodenum

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