The 2.0 version of rSNPBase

Variant report

Variant rs15788
Chromosome Location chr4:100802597-100802598
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:100789600-100805200 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr4:100789600-100814200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr4:100789800-100805200 Weak transcription H1 Cell Line embryonic stem cell
4 chr4:100790400-100814600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr4:100796800-100803200 Strong transcription Primary T cells from cord blood blood
6 chr4:100797000-100809600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr4:100797600-100803600 Strong transcription Brain Hippocampus Middle brain
8 chr4:100797600-100809000 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr4:100797800-100803400 Strong transcription Fetal Lung lung
10 chr4:100797800-100808400 Strong transcription Adipose Nuclei Adipose
11 chr4:100798000-100806200 Strong transcription Primary B cells from peripheral blood blood
12 chr4:100798000-100808200 Strong transcription Liver Liver
13 chr4:100798000-100809600 Strong transcription Primary monocytes fromperipheralblood blood
14 chr4:100798000-100810800 Strong transcription Primary T helper cells fromperipheralblood blood
15 chr4:100798200-100803400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr4:100798200-100808400 Strong transcription Placenta Placenta
17 chr4:100798400-100806400 Strong transcription HSMM muscle
18 chr4:100798400-100814200 Weak transcription Stomach Mucosa stomach
19 chr4:100798600-100803200 Strong transcription Brain Cingulate Gyrus brain
20 chr4:100798600-100803200 Strong transcription Skeletal Muscle Female skeletal muscle
21 chr4:100798600-100805200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr4:100798600-100807600 Strong transcription Duodenum Mucosa Duodenum
23 chr4:100798600-100809000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr4:100798800-100803800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr4:100798800-100808400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr4:100799000-100803800 Strong transcription Primary B cells from cord blood blood
27 chr4:100799000-100804800 Strong transcription HMEC breast
28 chr4:100799000-100805600 Strong transcription Rectal Mucosa Donor 29 rectum
29 chr4:100799000-100805800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr4:100799000-100806200 Strong transcription Primary T regulatory cells fromperipheralblood blood
31 chr4:100799000-100806600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr4:100799000-100806600 Strong transcription Osteobl bone
33 chr4:100799000-100808200 Strong transcription NHDF-Ad bronchial
34 chr4:100799000-100813400 Strong transcription Primary T cells fromperipheralblood blood
35 chr4:100799200-100803600 Strong transcription Primary hematopoietic stem cells blood
36 chr4:100799200-100803800 Strong transcription Fetal Thymus thymus
37 chr4:100799200-100806200 Strong transcription Dnd41 blood
38 chr4:100799200-100807200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr4:100799200-100808400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr4:100799200-100808400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr4:100799200-100811000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr4:100799400-100803000 Strong transcription HSMMtube muscle
43 chr4:100799400-100803200 Strong transcription Fetal Muscle Leg muscle
44 chr4:100799400-100803200 Strong transcription Stomach Smooth Muscle stomach
45 chr4:100799400-100805600 Strong transcription Primary T helper cells PMA-I stimulated --
46 chr4:100799400-100806200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr4:100799400-100812200 Weak transcription HepG2 liver
48 chr4:100799600-100803000 Strong transcription Skeletal Muscle Male skeletal muscle
49 chr4:100799600-100803200 Strong transcription HUES6 Cell Line embryonic stem cell
50 chr4:100799600-100803200 Strong transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015