The 2.0 version of rSNPBase

Variant report

Variant rs1595415
Chromosome Location chr2:20167966-20167967
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20102800-20173200 Weak transcription Fetal Brain Male brain
2 chr2:20117600-20188400 Weak transcription Brain Angular Gyrus brain
3 chr2:20128400-20188400 Weak transcription Colon Smooth Muscle Colon
4 chr2:20128400-20189200 Weak transcription Small Intestine intestine
5 chr2:20129400-20184800 Weak transcription Esophagus oesophagus
6 chr2:20129600-20189000 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr2:20130200-20189000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr2:20130400-20188800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:20130600-20188800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr2:20131800-20189000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr2:20133600-20184800 Weak transcription Psoas Muscle Psoas
12 chr2:20133800-20173200 Weak transcription NHEK skin
13 chr2:20133800-20176800 Weak transcription HMEC breast
14 chr2:20134200-20168600 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr2:20136400-20177000 Weak transcription GM12878-XiMat blood
16 chr2:20136400-20177200 Weak transcription Rectal Smooth Muscle rectum
17 chr2:20136600-20171200 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr2:20136600-20177200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr2:20136800-20171400 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr2:20136800-20188800 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr2:20136800-20189000 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr2:20138000-20177000 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr2:20138200-20171400 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr2:20138200-20188800 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr2:20138600-20184800 Weak transcription Aorta Aorta
26 chr2:20144600-20173200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr2:20144600-20173400 Weak transcription H9 Cell Line embryonic stem cell
28 chr2:20144600-20173600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr2:20144800-20168600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr2:20145000-20168600 Weak transcription Primary B cells from cord blood blood
31 chr2:20145000-20176800 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr2:20145200-20188000 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr2:20146000-20173200 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr2:20147600-20171000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr2:20148400-20174600 Weak transcription NH-A brain
36 chr2:20149600-20171000 Weak transcription HUVEC blood vessel
37 chr2:20149600-20174800 Weak transcription NHDF-Ad bronchial
38 chr2:20150800-20171000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr2:20152400-20173200 Weak transcription Brain Anterior Caudate brain
40 chr2:20152400-20173200 Weak transcription HSMM muscle
41 chr2:20153000-20168400 Weak transcription Hela-S3 cervix
42 chr2:20153200-20177400 Weak transcription Brain Germinal Matrix brain
43 chr2:20153200-20184400 Weak transcription Brain Hippocampus Middle brain
44 chr2:20156000-20171000 Weak transcription Fetal Intestine Large intestine
45 chr2:20156200-20174800 Weak transcription Liver Liver
46 chr2:20157800-20187200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr2:20159600-20173200 Weak transcription Pancreas Pancrea
48 chr2:20160600-20181200 Strong transcription A549 lung
49 chr2:20161200-20173200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr2:20161600-20173200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015