Variant report

Variant rs159620
Chromosome Location chr5:59188163-59188164
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:59160800-59189000 Weak transcription Aorta Aorta
2 chr5:59186600-59190600 Active TSS Pancreatic Islets Pancreatic Islet
3 chr5:59187400-59190200 Active TSS HSMMtube muscle
4 chr5:59187600-59188200 Active TSS Fetal Brain Male brain
5 chr5:59187600-59188400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
6 chr5:59187600-59188400 Active TSS Brain Angular Gyrus brain
7 chr5:59187600-59188600 Bivalent/Poised TSS HSMM muscle
8 chr5:59187800-59188200 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr5:59187800-59188200 Flanking Bivalent TSS/Enh HUES48 Cell Line embryonic stem cell
10 chr5:59187800-59188200 Bivalent Enhancer Fetal Intestine Large intestine
11 chr5:59187800-59188400 Bivalent/Poised TSS Brain Germinal Matrix brain
12 chr5:59187800-59188400 Bivalent Enhancer Psoas Muscle Psoas
13 chr5:59187800-59188800 Active TSS Gastric stomach
14 chr5:59187800-59189000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
15 chr5:59187800-59189000 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
16 chr5:59187800-59189200 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
17 chr5:59187800-59189200 Bivalent/Poised TSS Brain Cingulate Gyrus brain
18 chr5:59187800-59189400 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr5:59187800-59190000 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
20 chr5:59187800-59190200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
21 chr5:59187800-59190200 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
22 chr5:59187800-59190400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
23 chr5:59187800-59190600 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
24 chr5:59187800-59190600 Active TSS Brain Anterior Caudate brain
25 chr5:59188000-59188200 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
26 chr5:59188000-59188200 Flanking Bivalent TSS/Enh Ganglion Eminence derived primary cultured neurospheres brain
27 chr5:59188000-59188200 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
28 chr5:59188000-59188200 Active TSS Brain Inferior Temporal Lobe brain
29 chr5:59188000-59188200 Bivalent/Poised TSS Fetal Stomach stomach
30 chr5:59188000-59188200 Bivalent/Poised TSS NH-A brain
31 chr5:59188000-59188400 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr5:59188000-59188400 Bivalent/Poised TSS iPS DF 19.11 Cell Line embryonic stem cell
33 chr5:59188000-59188600 Bivalent Enhancer hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr5:59188000-59188600 Flanking Bivalent TSS/Enh Muscle Satellite Cultured Cells --
35 chr5:59188000-59188600 Flanking Active TSS Fetal Brain Female brain
36 chr5:59188000-59189000 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
37 chr5:59188000-59190000 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
38 chr5:59188000-59190200 Bivalent/Poised TSS Fetal Intestine Small intestine
39 chr5:59188000-59190400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell

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