Variant report

Variant rs1611600
Chromosome Location chr6:29854416-29854417
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29848400-29854600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:29850800-29854600 Weak transcription Primary B cells from cord blood blood
3 chr6:29853000-29854800 Weak transcription Primary hematopoietic stem cells blood
4 chr6:29853800-29854600 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr6:29854000-29854600 Enhancers Colon Smooth Muscle Colon
6 chr6:29854000-29854600 Enhancers Rectal Mucosa Donor 31 rectum
7 chr6:29854000-29854800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr6:29854000-29855000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
9 chr6:29854000-29855000 Enhancers Small Intestine intestine
10 chr6:29854000-29855400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr6:29854200-29854600 Enhancers Liver Liver
12 chr6:29854200-29854600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
13 chr6:29854200-29854600 Flanking Active TSS Fetal Intestine Small intestine
14 chr6:29854200-29854600 Enhancers Rectal Mucosa Donor 29 rectum
15 chr6:29854200-29854600 Enhancers HepG2 liver
16 chr6:29854200-29854600 Enhancers NHDF-Ad bronchial
17 chr6:29854200-29854800 Bivalent Enhancer Primary monocytes fromperipheralblood blood
18 chr6:29854200-29854800 Enhancers Stomach Mucosa stomach
19 chr6:29854200-29855000 Enhancers Primary B cells from peripheral blood blood
20 chr6:29854200-29855000 Enhancers Primary T helper naive cells from peripheral blood blood
21 chr6:29854200-29855000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
22 chr6:29854200-29855000 Enhancers Primary Natural Killer cells fromperipheralblood blood
23 chr6:29854200-29855000 Enhancers Skeletal Muscle Female skeletal muscle
24 chr6:29854200-29855200 Flanking Active TSS Hela-S3 cervix
25 chr6:29854200-29855800 Flanking Active TSS Stomach Smooth Muscle stomach
26 chr6:29854400-29854600 Enhancers Adipose Nuclei Adipose
27 chr6:29854400-29854600 Enhancers Brain Anterior Caudate brain
28 chr6:29854400-29854600 Enhancers Rectal Smooth Muscle rectum
29 chr6:29854400-29854600 Enhancers HMEC breast
30 chr6:29854400-29854600 Enhancers Monocytes-CD14+_RO01746 blood
31 chr6:29854400-29854800 Active TSS GM12878-XiMat blood
32 chr6:29854400-29855000 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr6:29854400-29855000 Weak transcription Lung lung
34 chr6:29854400-29855200 Flanking Active TSS Duodenum Mucosa Duodenum
35 chr6:29854400-29855400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr6:29854400-29856600 Active TSS Fetal Intestine Large intestine

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