Variant report

Variant rs162353
Chromosome Location chr21:44862077-44862078
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:44848200-44862800 Weak transcription Right Atrium heart
2 chr21:44852000-44862600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr21:44855400-44863000 Weak transcription H9 Cell Line embryonic stem cell
4 chr21:44856400-44862600 Weak transcription Spleen Spleen
5 chr21:44856800-44873200 Enhancers Placenta Placenta
6 chr21:44857400-44866000 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr21:44858800-44863400 Enhancers Fetal Intestine Large intestine
8 chr21:44858800-44867800 Enhancers Fetal Intestine Small intestine
9 chr21:44859000-44864000 Enhancers Stomach Mucosa stomach
10 chr21:44859200-44863200 Enhancers Pancreas Pancrea
11 chr21:44859200-44863800 Enhancers Rectal Mucosa Donor 31 rectum
12 chr21:44859400-44862200 Enhancers Liver Liver
13 chr21:44859400-44862800 Weak transcription HSMM muscle
14 chr21:44859400-44883600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr21:44859600-44862200 Weak transcription Fetal Heart heart
16 chr21:44859800-44862200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr21:44859800-44862800 Weak transcription HSMMtube muscle
18 chr21:44859800-44864800 Enhancers HMEC breast
19 chr21:44860000-44864000 Enhancers Lung lung
20 chr21:44860600-44865200 Weak transcription Placenta Amnion Placenta Amnion
21 chr21:44860800-44863800 Enhancers Rectal Mucosa Donor 29 rectum
22 chr21:44861000-44862200 Flanking Active TSS Hela-S3 cervix
23 chr21:44861200-44864600 Weak transcription GM12878-XiMat blood
24 chr21:44861200-44865800 Enhancers Duodenum Mucosa Duodenum
25 chr21:44861400-44862600 Weak transcription Fetal Lung lung
26 chr21:44861400-44863000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr21:44861400-44863000 Enhancers Sigmoid Colon Sigmoid Colon
28 chr21:44861400-44863800 Enhancers Fetal Muscle Leg muscle
29 chr21:44861400-44864000 Enhancers Colonic Mucosa Colon
30 chr21:44861400-44865200 Bivalent Enhancer Fetal Muscle Trunk muscle
31 chr21:44861400-44865400 Enhancers Esophagus oesophagus
32 chr21:44861600-44862400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr21:44861600-44862800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr21:44861600-44862800 Weak transcription Muscle Satellite Cultured Cells --
35 chr21:44861600-44862800 Enhancers Adipose Nuclei Adipose
36 chr21:44861600-44866400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr21:44861800-44862800 Weak transcription NHEK skin
38 chr21:44861800-44863800 Enhancers HepG2 liver
39 chr21:44861800-44869200 Weak transcription Fetal Brain Female brain
40 chr21:44862000-44862800 Weak transcription Gastric stomach
41 chr21:44862000-44863200 Enhancers Left Ventricle heart
42 chr21:44862000-44864200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr21:44862000-44864200 Enhancers Right Ventricle heart
44 chr21:44862000-44864600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
45 chr21:44862000-44870400 Enhancers A549 lung

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