Variant report
| Variant | rs162501 |
|---|---|
| Chromosome Location | chr21:28333554-28333555 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr21:28293000-28334800 | Weak transcription | Hela-S3 | cervix |
| 2 | chr21:28306600-28333600 | Weak transcription | Fetal Intestine Large | intestine |
| 3 | chr21:28309600-28337200 | Weak transcription | Fetal Heart | heart |
| 4 | chr21:28318600-28333800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 5 | chr21:28318600-28336600 | Weak transcription | Left Ventricle | heart |
| 6 | chr21:28319200-28334200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 7 | chr21:28319600-28334600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 8 | chr21:28323200-28334600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 9 | chr21:28325600-28334200 | Weak transcription | NHLF | lung |
| 10 | chr21:28327200-28334800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 11 | chr21:28327400-28333600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 12 | chr21:28328000-28333800 | Genic enhancers | NHDF-Ad | bronchial |
| 13 | chr21:28328800-28334400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 14 | chr21:28329400-28334600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 15 | chr21:28329600-28334200 | Weak transcription | Colon Smooth Muscle | Colon |
| 16 | chr21:28330200-28334200 | Strong transcription | Fetal Muscle Trunk | muscle |
| 17 | chr21:28330400-28333600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 18 | chr21:28330800-28334200 | Weak transcription | Fetal Brain Male | brain |
| 19 | chr21:28331200-28334000 | Weak transcription | Fetal Brain Female | brain |
| 20 | chr21:28331200-28334600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 21 | chr21:28331400-28334400 | Weak transcription | Brain Germinal Matrix | brain |
| 22 | chr21:28331600-28338000 | Weak transcription | Liver | Liver |
| 23 | chr21:28332000-28333800 | Transcr. at gene 5' and 3' | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 24 | chr21:28332200-28335200 | Transcr. at gene 5' and 3' | HSMMtube | muscle |
| 25 | chr21:28332400-28334800 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 26 | chr21:28332400-28335800 | Weak transcription | Right Atrium | heart |
| 27 | chr21:28332600-28334600 | Weak transcription | Aorta | Aorta |
| 28 | chr21:28332600-28336400 | Active TSS | Duodenum Smooth Muscle | Duodenum |
| 29 | chr21:28332600-28336600 | Weak transcription | Spleen | Spleen |
| 30 | chr21:28332800-28334000 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 31 | chr21:28332800-28334800 | Genic enhancers | Osteobl | bone |
| 32 | chr21:28333000-28333600 | Enhancers | Adipose Nuclei | Adipose |
| 33 | chr21:28333000-28333600 | Weak transcription | Fetal Kidney | kidney |
| 34 | chr21:28333000-28333800 | Enhancers | Small Intestine | intestine |
| 35 | chr21:28333200-28333600 | Weak transcription | Fetal Muscle Leg | muscle |
| 36 | chr21:28333200-28333600 | Active TSS | Ovary | ovary |
| 37 | chr21:28333200-28333800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 38 | chr21:28333200-28334200 | Enhancers | Stomach Mucosa | stomach |
| 39 | chr21:28333200-28335400 | Enhancers | Fetal Stomach | stomach |
| 40 | chr21:28333400-28333600 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 41 | chr21:28333400-28333600 | Genic enhancers | HSMM | muscle |
