Variant report
| Variant | rs1630692 |
|---|---|
| Chromosome Location | chr12:57984504-57984505 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:57966600-57984600 | Weak transcription | Gastric | stomach |
| 2 | chr12:57984000-57986400 | Flanking Active TSS | Dnd41 | blood |
| 3 | chr12:57984200-57984600 | Flanking Active TSS | H1 Cell Line | embryonic stem cell |
| 4 | chr12:57984200-57984600 | Flanking Active TSS | HUES6 Cell Line | embryonic stem cell |
| 5 | chr12:57984200-57984600 | Flanking Active TSS | iPS-15b Cell Line | embryonic stem cell |
| 6 | chr12:57984200-57984600 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 7 | chr12:57984200-57984600 | Flanking Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 8 | chr12:57984200-57984600 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 9 | chr12:57984200-57984600 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 10 | chr12:57984200-57984600 | Flanking Active TSS | Primary T helper 17 cells PMA-I stimulated | -- |
| 11 | chr12:57984200-57984600 | Flanking Active TSS | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 12 | chr12:57984200-57984600 | Flanking Active TSS | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 13 | chr12:57984200-57984600 | Flanking Active TSS | Brain Hippocampus Middle | brain |
| 14 | chr12:57984200-57984600 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 15 | chr12:57984200-57984600 | Enhancers | Spleen | Spleen |
| 16 | chr12:57984200-57984800 | Flanking Active TSS | HUES48 Cell Line | embryonic stem cell |
| 17 | chr12:57984200-57984800 | Flanking Active TSS | HUES64 Cell Line | embryonic stem cell |
| 18 | chr12:57984200-57984800 | Flanking Active TSS | Primary T cells from cord blood | blood |
| 19 | chr12:57984200-57984800 | Flanking Active TSS | Primary hematopoietic stem cells short term culture | blood |
| 20 | chr12:57984200-57984800 | Flanking Active TSS | Primary T helper memory cells from peripheral blood 2 | blood |
| 21 | chr12:57984200-57984800 | Flanking Active TSS | Primary T helper naive cells from peripheral blood | blood |
| 22 | chr12:57984200-57984800 | Flanking Active TSS | Primary T helper naive cells fromperipheralblood | blood |
| 23 | chr12:57984200-57984800 | Flanking Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 24 | chr12:57984200-57984800 | Flanking Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 25 | chr12:57984200-57984800 | Flanking Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
| 26 | chr12:57984200-57984800 | Flanking Active TSS | Colon Smooth Muscle | Colon |
| 27 | chr12:57984200-57984800 | Flanking Active TSS | Fetal Brain Female | brain |
| 28 | chr12:57984200-57984800 | Flanking Active TSS | Skeletal Muscle Male | skeletal muscle |
| 29 | chr12:57984200-57984800 | Flanking Active TSS | Skeletal Muscle Female | skeletal muscle |
| 30 | chr12:57984200-57984800 | Flanking Active TSS | GM12878-XiMat | blood |
| 31 | chr12:57984200-57984800 | Flanking Active TSS | Hela-S3 | cervix |
| 32 | chr12:57984200-57984800 | Flanking Active TSS | HepG2 | liver |
| 33 | chr12:57984200-57984800 | Flanking Active TSS | K562 | blood |
| 34 | chr12:57984200-57985000 | Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 35 | chr12:57984200-57985600 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 36 | chr12:57984200-57985600 | Active TSS | Duodenum Smooth Muscle | Duodenum |
| 37 | chr12:57984200-57985600 | Active TSS | A549 | lung |
| 38 | chr12:57984200-57985800 | Active TSS | H9 Cell Line | embryonic stem cell |
| 39 | chr12:57984200-57985800 | Bivalent/Poised TSS | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 40 | chr12:57984200-57985800 | Active TSS | Rectal Smooth Muscle | rectum |
| 41 | chr12:57984200-57986000 | Flanking Active TSS | Monocytes-CD14+_RO01746 | blood |
| 42 | chr12:57984200-57986200 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
| 43 | chr12:57984200-57986200 | Flanking Active TSS | Primary T regulatory cells fromperipheralblood | blood |
| 44 | chr12:57984200-57986200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 45 | chr12:57984200-57986200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 46 | chr12:57984200-57986400 | Active TSS | iPS-20b Cell Line | embryonic stem cell |
| 47 | chr12:57984400-57984600 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 48 | chr12:57984400-57984600 | Enhancers | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 49 | chr12:57984400-57984600 | Flanking Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 50 | chr12:57984400-57984600 | Enhancers | Primary T cells effector/memory enriched fromperipheralblood | blood |
