Variant report

Variant rs1632880
Chromosome Location chr6:29917610-29917611
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29911200-29920200 Weak transcription A549 lung
2 chr6:29911200-29921400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr6:29911600-29920400 Weak transcription Fetal Brain Male brain
4 chr6:29912400-29918000 Strong transcription Fetal Intestine Small intestine
5 chr6:29912600-29921000 Weak transcription Psoas Muscle Psoas
6 chr6:29912800-29924200 Weak transcription Right Atrium heart
7 chr6:29913000-29924000 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr6:29913000-29924200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr6:29913400-29917800 Strong transcription Breast Myoepithelial Primary Cells Breast
10 chr6:29913400-29917800 Weak transcription Hela-S3 cervix
11 chr6:29913400-29918800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr6:29913400-29919600 Weak transcription Fetal Muscle Trunk muscle
13 chr6:29913400-29920800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr6:29913400-29932200 Weak transcription Brain Anterior Caudate brain
15 chr6:29913400-29932600 Weak transcription Brain Substantia Nigra brain
16 chr6:29913600-29918800 Weak transcription Muscle Satellite Cultured Cells --
17 chr6:29913600-29919200 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr6:29913600-29920400 Weak transcription HMEC breast
19 chr6:29913600-29921600 Weak transcription NHEK skin
20 chr6:29913600-29924400 Weak transcription H1 Cell Line embryonic stem cell
21 chr6:29913600-29925400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr6:29913800-29921000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr6:29913800-29932200 Weak transcription Small Intestine intestine
24 chr6:29914000-29918000 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr6:29914000-29918200 Strong transcription Rectal Mucosa Donor 29 rectum
26 chr6:29914000-29918200 Strong transcription Thymus Thymus
27 chr6:29914000-29920600 Weak transcription NHLF lung
28 chr6:29914000-29921000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr6:29914000-29923800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr6:29914000-29924200 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr6:29914000-29932200 Weak transcription Colon Smooth Muscle Colon
32 chr6:29914200-29918000 Genic enhancers Primary T cells fromperipheralblood blood
33 chr6:29914200-29918000 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr6:29914200-29918200 Strong transcription Primary monocytes fromperipheralblood blood
35 chr6:29914200-29919000 Strong transcription Primary B cells from cord blood blood
36 chr6:29914200-29919200 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr6:29914200-29920800 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr6:29914400-29917800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr6:29914600-29920200 Weak transcription Osteobl bone
40 chr6:29914600-29932200 Weak transcription Colonic Mucosa Colon
41 chr6:29914800-29918000 Genic enhancers Primary T killer naive cells fromperipheralblood blood
42 chr6:29914800-29932200 Weak transcription Right Ventricle heart
43 chr6:29915000-29918000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr6:29915200-29918400 Strong transcription Primary neutrophils fromperipheralblood blood
45 chr6:29915200-29920600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr6:29915400-29918000 Strong transcription Primary B cells from peripheral blood blood
47 chr6:29915400-29918000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
48 chr6:29915400-29920400 Weak transcription HSMM muscle
49 chr6:29915400-29931800 Weak transcription Fetal Thymus thymus
50 chr6:29915600-29917800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain

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