Variant report

Variant rs1641722
Chromosome Location chr12:12231195-12231196
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:12225000-12255000 Weak transcription Small Intestine intestine
2 chr12:12225200-12239400 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr12:12225400-12239000 Weak transcription H1 Cell Line embryonic stem cell
4 chr12:12225400-12239600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr12:12225400-12239600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr12:12225600-12239000 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr12:12225800-12240200 Weak transcription Fetal Stomach stomach
8 chr12:12226600-12245000 Weak transcription Fetal Brain Male brain
9 chr12:12226800-12235000 Weak transcription Pancreas Pancrea
10 chr12:12226800-12235200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr12:12226800-12238200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr12:12227000-12232000 Weak transcription Fetal Intestine Large intestine
13 chr12:12227000-12232200 Weak transcription Duodenum Mucosa Duodenum
14 chr12:12227000-12234200 Weak transcription Stomach Mucosa stomach
15 chr12:12227000-12234800 Weak transcription Colonic Mucosa Colon
16 chr12:12229200-12232200 Strong transcription Rectal Mucosa Donor 31 rectum
17 chr12:12229600-12238400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr12:12229800-12231400 Enhancers H9 Cell Line embryonic stem cell
19 chr12:12229800-12235200 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr12:12230000-12238600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr12:12230400-12232200 Weak transcription Fetal Intestine Small intestine
22 chr12:12230600-12231200 Enhancers iPS-18 Cell Line embryonic stem cell
23 chr12:12230600-12231600 Enhancers iPS-20b Cell Line embryonic stem cell
24 chr12:12230800-12231400 Enhancers HUES48 Cell Line embryonic stem cell
25 chr12:12230800-12231400 Enhancers HUES6 Cell Line embryonic stem cell
26 chr12:12231000-12234800 Weak transcription HepG2 liver
27 chr12:12231000-12235000 Weak transcription HUVEC blood vessel
28 chr12:12231000-12239200 Weak transcription iPS-15b Cell Line embryonic stem cell

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