Variant report

Variant rs1644818
Chromosome Location chr5:53399157-53399158
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:53357000-53408000 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr5:53377400-53412200 Weak transcription Primary hematopoietic stem cells blood
3 chr5:53377800-53408600 Weak transcription Primary B cells from cord blood blood
4 chr5:53380600-53408600 Weak transcription Fetal Intestine Large intestine
5 chr5:53380800-53399400 Weak transcription Primary T cells from cord blood blood
6 chr5:53380800-53408600 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr5:53387400-53400200 Weak transcription Pancreas Pancrea
8 chr5:53387600-53399800 Weak transcription Fetal Muscle Leg muscle
9 chr5:53387800-53399400 Weak transcription K562 blood
10 chr5:53387800-53402800 Weak transcription Lung lung
11 chr5:53389400-53416400 Weak transcription Left Ventricle heart
12 chr5:53390000-53404200 Weak transcription NHEK skin
13 chr5:53390000-53405600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr5:53391600-53410800 Weak transcription Primary monocytes fromperipheralblood blood
15 chr5:53391600-53411200 Weak transcription Primary B cells from peripheral blood blood
16 chr5:53394200-53399800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr5:53394200-53403200 Weak transcription Aorta Aorta
18 chr5:53394600-53399800 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr5:53394800-53399400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr5:53394800-53404400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr5:53395000-53399400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr5:53397400-53399800 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr5:53397400-53399800 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr5:53397600-53399800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr5:53398200-53399400 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr5:53398200-53401000 Enhancers Brain Germinal Matrix brain
27 chr5:53398400-53410000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr5:53398800-53400000 Weak transcription Fetal Kidney kidney

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