Variant report

Variant rs1645273
Chromosome Location chr5:53383314-53383315
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:53316200-53387400 Weak transcription Left Ventricle heart
2 chr5:53357000-53408000 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr5:53365200-53391200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr5:53367000-53384200 Weak transcription Fetal Intestine Small intestine
5 chr5:53368600-53388800 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr5:53370200-53383400 Weak transcription HMEC breast
7 chr5:53377400-53412200 Weak transcription Primary hematopoietic stem cells blood
8 chr5:53377600-53390800 Weak transcription Monocytes-CD14+_RO01746 blood
9 chr5:53377800-53408600 Weak transcription Primary B cells from cord blood blood
10 chr5:53379800-53387200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr5:53380000-53386200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr5:53380000-53389000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr5:53380200-53386200 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr5:53380200-53387200 Weak transcription Gastric stomach
15 chr5:53380200-53389000 Weak transcription Brain Inferior Temporal Lobe brain
16 chr5:53380200-53394200 Weak transcription Spleen Spleen
17 chr5:53380600-53387200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr5:53380600-53408600 Weak transcription Fetal Intestine Large intestine
19 chr5:53380800-53399400 Weak transcription Primary T cells from cord blood blood
20 chr5:53380800-53408600 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr5:53381000-53383400 Weak transcription A549 lung
22 chr5:53382000-53383400 Enhancers Colon Smooth Muscle Colon
23 chr5:53382000-53384600 Enhancers Fetal Heart heart
24 chr5:53382200-53384600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr5:53382400-53384600 Enhancers HSMMtube muscle
26 chr5:53382600-53383800 Enhancers Muscle Satellite Cultured Cells --
27 chr5:53382600-53384600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr5:53382600-53384600 Enhancers NH-A brain
29 chr5:53382600-53384600 Enhancers NHDF-Ad bronchial
30 chr5:53382600-53384600 Enhancers NHLF lung
31 chr5:53382800-53384400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr5:53382800-53384600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr5:53383000-53383400 Flanking Active TSS Osteobl bone
34 chr5:53383000-53384200 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr5:53383000-53387400 Weak transcription Fetal Stomach stomach
36 chr5:53383000-53387600 Weak transcription Right Ventricle heart
37 chr5:53383200-53383400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr5:53383200-53383400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr5:53383200-53383400 Enhancers HSMM muscle
40 chr5:53383200-53383600 Active TSS Stomach Smooth Muscle stomach
41 chr5:53383200-53384200 Enhancers Hela-S3 cervix
42 chr5:53383200-53384400 Enhancers HUVEC blood vessel
43 chr5:53383200-53384400 Enhancers NHEK skin
44 chr5:53383200-53386600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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