Variant report

Variant	rs1646508
Chromosome Location	chr7:137366760-137366761
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:137358034..137360973-chr7:137366222..137368060,2	K562	blood:
2	chr7:137364114..137367092-chr7:137379026..137381477,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs1646342	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs270903	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs270905	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022793	chr7:137187383-137619359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv464731	chr7:137356651-137404781	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
3	nsv608466	chr7:137356651-137404781	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137355800-137370600	Weak transcription	Aorta	Aorta
2	chr7:137357000-137367600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr7:137364800-137370000	Weak transcription	Brain Angular Gyrus	brain
4	chr7:137365000-137366800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr7:137365600-137368200	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chr7:137365600-137368200	Enhancers	HSMMtube	muscle
7	chr7:137365800-137368400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr7:137365800-137368400	Enhancers	HSMM	muscle
9	chr7:137366000-137367000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr7:137366000-137367200	Enhancers	NH-A	brain
11	chr7:137366000-137368000	Enhancers	HMEC	breast
12	chr7:137366200-137366800	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr7:137366400-137366800	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr7:137366400-137366800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr7:137366400-137366800	Enhancers	NHDF-Ad	bronchial
16	chr7:137366400-137367000	Enhancers	HUES48 Cell Line	embryonic stem cell
17	chr7:137366400-137367200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr7:137366400-137367400	Enhancers	Hela-S3	cervix
19	chr7:137366400-137367600	Flanking Active TSS	Osteobl	bone
20	chr7:137366400-137367800	Enhancers	NHLF	lung
21	chr7:137366400-137368400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr7:137366400-137368400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr7:137366600-137366800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr7:137366600-137366800	Enhancers	Right Atrium	heart
25	chr7:137366600-137367000	Enhancers	iPS-20b Cell Line	embryonic stem cell
26	chr7:137366600-137367000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr7:137366600-137367000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr7:137366600-137367000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
29	chr7:137366600-137367000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
30	chr7:137366600-137367400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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