Variant report

Variant rs1648307
Chromosome Location chr15:45471489-45471490
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:45459800-45471800 Weak transcription Small Intestine intestine
2 chr15:45459800-45478000 Weak transcription Aorta Aorta
3 chr15:45460000-45471600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr15:45460000-45471800 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr15:45460000-45472200 Weak transcription Muscle Satellite Cultured Cells --
6 chr15:45460000-45474800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr15:45460000-45477200 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr15:45460000-45478600 Weak transcription Thymus Thymus
9 chr15:45460200-45478000 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr15:45460400-45475200 Weak transcription Brain Inferior Temporal Lobe brain
11 chr15:45460600-45471800 Weak transcription Esophagus oesophagus
12 chr15:45460600-45475400 Weak transcription Brain Anterior Caudate brain
13 chr15:45460600-45475600 Weak transcription Left Ventricle heart
14 chr15:45460600-45478000 Weak transcription Rectal Smooth Muscle rectum
15 chr15:45460600-45478200 Weak transcription Adipose Nuclei Adipose
16 chr15:45461200-45471800 Weak transcription Pancreas Pancrea
17 chr15:45461200-45473200 Weak transcription Fetal Brain Male brain
18 chr15:45461800-45471800 Strong transcription Fetal Stomach stomach
19 chr15:45462200-45477200 Weak transcription Brain Hippocampus Middle brain
20 chr15:45462400-45473600 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr15:45462800-45471600 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr15:45462800-45473800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr15:45463000-45473800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr15:45463200-45471600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr15:45463200-45471600 Strong transcription HepG2 liver
26 chr15:45463600-45471600 Strong transcription Fetal Brain Female brain
27 chr15:45464200-45472400 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr15:45464600-45472400 Weak transcription Colonic Mucosa Colon
29 chr15:45465600-45471600 Strong transcription Cortex derived primary cultured neurospheres brain
30 chr15:45466000-45478800 Weak transcription Right Ventricle heart
31 chr15:45466200-45471600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr15:45466400-45471600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr15:45466400-45477600 Weak transcription Colon Smooth Muscle Colon
34 chr15:45466800-45472000 Weak transcription HSMMtube muscle
35 chr15:45466800-45473800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr15:45467600-45476200 Weak transcription Placenta Amnion Placenta Amnion
37 chr15:45467600-45477400 Weak transcription Brain Angular Gyrus brain
38 chr15:45467800-45471600 Weak transcription H1 Cell Line embryonic stem cell
39 chr15:45467800-45471600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr15:45467800-45473800 Weak transcription H9 Cell Line embryonic stem cell
41 chr15:45467800-45477400 Weak transcription Brain Cingulate Gyrus brain
42 chr15:45468000-45477800 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr15:45468400-45471800 Weak transcription Lung lung
44 chr15:45470000-45473800 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr15:45470200-45471600 Weak transcription Ovary ovary
46 chr15:45470200-45472600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr15:45470200-45475600 Weak transcription Placenta Placenta
48 chr15:45470400-45471600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr15:45470400-45471600 Weak transcription Duodenum Mucosa Duodenum
50 chr15:45470400-45473200 Weak transcription Stomach Smooth Muscle stomach

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