The 2.0 version of rSNPBase

Variant report

Variant rs1653615
Chromosome Location chr12:121608316-121608317
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:121571800-121623200 Weak transcription Colonic Mucosa Colon
2 chr12:121583000-121613200 Weak transcription Primary B cells from cord blood blood
3 chr12:121583000-121634600 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr12:121583800-121623600 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr12:121583800-121634400 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr12:121584600-121626600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr12:121586200-121623600 Weak transcription Rectal Smooth Muscle rectum
8 chr12:121594000-121612600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr12:121594200-121627600 Weak transcription Right Ventricle heart
10 chr12:121596000-121614800 Weak transcription Gastric stomach
11 chr12:121596200-121622200 Weak transcription Esophagus oesophagus
12 chr12:121596200-121625600 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr12:121596200-121629000 Weak transcription Left Ventricle heart
14 chr12:121596400-121609000 Strong transcription Brain Cingulate Gyrus brain
15 chr12:121596400-121609400 Strong transcription Brain Hippocampus Middle brain
16 chr12:121596400-121610200 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr12:121596400-121634200 Weak transcription Primary hematopoietic stem cells blood
18 chr12:121597800-121625600 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr12:121598600-121610400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
20 chr12:121599000-121617200 Weak transcription Fetal Stomach stomach
21 chr12:121600000-121610200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
22 chr12:121602400-121634600 Weak transcription Fetal Thymus thymus
23 chr12:121603600-121608600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr12:121603800-121608600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr12:121603800-121623600 Weak transcription Fetal Intestine Small intestine
26 chr12:121604000-121615800 Weak transcription Duodenum Mucosa Duodenum
27 chr12:121604200-121613200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr12:121604200-121613200 Weak transcription Colon Smooth Muscle Colon
29 chr12:121604200-121613800 Weak transcription Adipose Nuclei Adipose
30 chr12:121604200-121614600 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr12:121604200-121619800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr12:121604400-121613200 Weak transcription Primary B cells from peripheral blood blood
33 chr12:121604400-121614800 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr12:121604400-121622200 Weak transcription Lung lung
35 chr12:121604600-121611400 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr12:121605000-121623400 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr12:121605400-121611200 Weak transcription Brain Anterior Caudate brain
38 chr12:121605400-121611200 Weak transcription Pancreas Pancrea
39 chr12:121605400-121611200 Weak transcription Spleen Spleen
40 chr12:121605400-121612400 Weak transcription Primary T cells from cord blood blood
41 chr12:121605400-121613600 Weak transcription Stomach Smooth Muscle stomach
42 chr12:121605400-121615000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr12:121605600-121608800 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr12:121605600-121610800 Strong transcription Primary monocytes fromperipheralblood blood
45 chr12:121605800-121611200 Weak transcription Ovary ovary
46 chr12:121606000-121612600 Weak transcription Primary T cells fromperipheralblood blood
47 chr12:121606200-121611400 Weak transcription Brain Angular Gyrus brain
48 chr12:121606200-121614600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr12:121606400-121608400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr12:121606600-121609000 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015