Variant report

Variant	rs1654533
Chromosome Location	chr19:51474426-51474427
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:51471200-51474800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr19:51471600-51474800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr19:51472800-51482200	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr19:51473000-51477400	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr19:51473000-51480600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr19:51473200-51474800	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr19:51473200-51474800	Enhancers	Brain Substantia Nigra	brain
8	chr19:51473200-51476200	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr19:51473200-51477600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr19:51473200-51479000	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr19:51473200-51479000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr19:51473200-51480800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
13	chr19:51473200-51482400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr19:51473800-51479000	Weak transcription	NHEK	skin
15	chr19:51474000-51475600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr19:51474000-51475600	Weak transcription	Esophagus	oesophagus
17	chr19:51474000-51475600	Weak transcription	HMEC	breast
18	chr19:51474400-51474800	Enhancers	iPS-15b Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links