Variant report

Variant rs1654535
Chromosome Location chr19:51473947-51473948
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:51470000-51474000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr19:51471200-51474000 Enhancers HMEC breast
3 chr19:51471200-51474800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
4 chr19:51471600-51474800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr19:51472800-51482200 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr19:51473000-51477400 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr19:51473000-51480600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr19:51473200-51474000 Bivalent Enhancer Brain Inferior Temporal Lobe brain
9 chr19:51473200-51474800 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr19:51473200-51474800 Enhancers Brain Substantia Nigra brain
11 chr19:51473200-51476200 Weak transcription Placenta Amnion Placenta Amnion
12 chr19:51473200-51477600 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr19:51473200-51479000 Weak transcription H1 Cell Line embryonic stem cell
14 chr19:51473200-51479000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr19:51473200-51480800 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr19:51473200-51482400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr19:51473400-51474000 Enhancers Brain Cingulate Gyrus brain
18 chr19:51473600-51474000 Bivalent Enhancer Brain Anterior Caudate brain
19 chr19:51473600-51474000 Bivalent Enhancer Brain Hippocampus Middle brain
20 chr19:51473800-51474000 Enhancers Esophagus oesophagus
21 chr19:51473800-51479000 Weak transcription NHEK skin

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