Variant report

Variant rs165809
Chromosome Location chr22:20817808-20817809
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20792400-20832000 Weak transcription A549 lung
2 chr22:20793200-20825000 Weak transcription Fetal Kidney kidney
3 chr22:20793800-20821600 Weak transcription Fetal Heart heart
4 chr22:20793800-20825000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr22:20794400-20827800 Weak transcription Stomach Mucosa stomach
6 chr22:20797000-20818200 Weak transcription HepG2 liver
7 chr22:20797200-20818400 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr22:20797400-20818600 Weak transcription Rectal Smooth Muscle rectum
9 chr22:20799200-20822800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr22:20801200-20823400 Weak transcription Fetal Brain Male brain
11 chr22:20801200-20848800 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr22:20806600-20837000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr22:20810600-20818200 Weak transcription Muscle Satellite Cultured Cells --
14 chr22:20810600-20820600 Strong transcription Fetal Intestine Small intestine
15 chr22:20810600-20825000 Weak transcription NHDF-Ad bronchial
16 chr22:20810600-20825800 Weak transcription NHEK skin
17 chr22:20810600-20827400 Strong transcription Fetal Stomach stomach
18 chr22:20810600-20848800 Weak transcription NH-A brain
19 chr22:20810800-20821600 Weak transcription Hela-S3 cervix
20 chr22:20811000-20822600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr22:20811000-20848800 Weak transcription HSMM muscle
22 chr22:20811200-20827400 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr22:20811200-20840600 Weak transcription HSMMtube muscle
24 chr22:20811200-20842800 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr22:20812400-20818000 Weak transcription Brain Substantia Nigra brain
26 chr22:20812400-20818400 Weak transcription Colon Smooth Muscle Colon
27 chr22:20812600-20818200 Weak transcription Right Ventricle heart
28 chr22:20813200-20818200 Weak transcription Ovary ovary
29 chr22:20813400-20818000 Weak transcription H1 Cell Line embryonic stem cell
30 chr22:20813400-20818200 Weak transcription Duodenum Mucosa Duodenum
31 chr22:20814200-20822800 Weak transcription Placenta Amnion Placenta Amnion
32 chr22:20814200-20825200 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr22:20814600-20818200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr22:20814600-20818200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr22:20814800-20818000 Weak transcription Fetal Intestine Large intestine
36 chr22:20815400-20818600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr22:20815600-20818000 Weak transcription Osteobl bone
38 chr22:20815600-20818200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr22:20816600-20818000 Strong transcription Fetal Adrenal Gland Adrenal Gland
40 chr22:20816600-20818200 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr22:20816600-20827600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr22:20816600-20827600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr22:20816800-20818600 Enhancers Skeletal Muscle Female skeletal muscle
44 chr22:20816800-20819200 Strong transcription Fetal Lung lung
45 chr22:20816800-20819600 Genic enhancers Fetal Muscle Trunk muscle
46 chr22:20816800-20819800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr22:20816800-20820000 Strong transcription Brain Inferior Temporal Lobe brain
48 chr22:20816800-20820400 Strong transcription Liver Liver
49 chr22:20816800-20826200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr22:20817000-20819000 Enhancers Primary hematopoietic stem cells blood

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