Variant report

Variant rs1669917
Chromosome Location chr12:42878100-42878101
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42875400-42878600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
2 chr12:42875400-42878800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr12:42875400-42878800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
4 chr12:42875400-42878800 Active TSS NHLF lung
5 chr12:42875800-42878400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
6 chr12:42875800-42878600 Active TSS Ovary ovary
7 chr12:42875800-42878600 Active TSS Right Atrium heart
8 chr12:42875800-42878600 Active TSS Right Ventricle heart
9 chr12:42876000-42878200 Active TSS iPS-18 Cell Line embryonic stem cell
10 chr12:42876000-42878200 Active TSS Brain Angular Gyrus brain
11 chr12:42876000-42878200 Active TSS Fetal Adrenal Gland Adrenal Gland
12 chr12:42876000-42878200 Active TSS Lung lung
13 chr12:42876000-42878200 Active TSS Rectal Mucosa Donor 29 rectum
14 chr12:42876000-42878400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr12:42876000-42878400 Active TSS Colon Smooth Muscle Colon
16 chr12:42876000-42878400 Active TSS Rectal Smooth Muscle rectum
17 chr12:42876000-42878600 Active TSS H9 Cell Line embryonic stem cell
18 chr12:42876000-42878600 Active TSS Aorta Aorta
19 chr12:42876200-42878200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
20 chr12:42876200-42878200 Bivalent/Poised TSS Primary T cells from cord blood blood
21 chr12:42876200-42878200 Active TSS Duodenum Mucosa Duodenum
22 chr12:42876200-42878200 Active TSS Gastric stomach
23 chr12:42876200-42878200 Active TSS NH-A brain
24 chr12:42876200-42878400 Active TSS Breast Myoepithelial Primary Cells Breast
25 chr12:42876200-42878400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
26 chr12:42876200-42878400 Active TSS Fetal Kidney kidney
27 chr12:42876200-42878400 Active TSS Left Ventricle heart
28 chr12:42876200-42878600 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
29 chr12:42876400-42878200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr12:42876400-42878200 Active TSS iPS-20b Cell Line embryonic stem cell
31 chr12:42876400-42878200 Flanking Active TSS Primary hematopoietic stem cells blood
32 chr12:42876400-42878200 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
33 chr12:42876400-42878200 Active TSS Brain Anterior Caudate brain
34 chr12:42876400-42878200 Active TSS Brain Substantia Nigra brain
35 chr12:42876400-42878200 Active TSS Pancreatic Islets Pancreatic Islet
36 chr12:42876400-42878200 Active TSS Fetal Lung lung
37 chr12:42876400-42878200 Active TSS Sigmoid Colon Sigmoid Colon
38 chr12:42876400-42878200 Active TSS HSMM muscle
39 chr12:42876400-42878200 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
40 chr12:42876400-42878400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr12:42876400-42878400 Active TSS HUES48 Cell Line embryonic stem cell
42 chr12:42876400-42878400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr12:42876400-42878400 Active TSS Osteobl bone
44 chr12:42876400-42878600 Active TSS Fetal Muscle Trunk muscle
45 chr12:42876400-42878600 Active TSS Psoas Muscle Psoas
46 chr12:42876400-42878800 Active TSS Stomach Smooth Muscle stomach
47 chr12:42876600-42878200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr12:42876600-42878200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
49 chr12:42876600-42878200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr12:42876600-42878200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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