The 2.0 version of rSNPBase

Variant report

Variant rs1678381
Chromosome Location chr13:95847330-95847331
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:95807000-95857800 Weak transcription Esophagus oesophagus
2 chr13:95807200-95865600 Weak transcription Colonic Mucosa Colon
3 chr13:95808400-95854600 Weak transcription NHEK skin
4 chr13:95813200-95858000 Weak transcription Aorta Aorta
5 chr13:95815200-95847800 Weak transcription Hela-S3 cervix
6 chr13:95827400-95872400 Weak transcription NH-A brain
7 chr13:95829400-95856000 Weak transcription Muscle Satellite Cultured Cells --
8 chr13:95830400-95857800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr13:95830400-95857800 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr13:95833600-95856800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr13:95833800-95855400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr13:95833800-95856600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr13:95833800-95859800 Weak transcription Colon Smooth Muscle Colon
14 chr13:95834000-95865400 Weak transcription Psoas Muscle Psoas
15 chr13:95834400-95849200 Weak transcription K562 blood
16 chr13:95838200-95867400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr13:95839200-95857000 Weak transcription Primary hematopoietic stem cells blood
18 chr13:95839400-95857200 Weak transcription Primary T cells fromperipheralblood blood
19 chr13:95839400-95857800 Weak transcription Primary T cells from cord blood blood
20 chr13:95839400-95863800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr13:95839600-95856800 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr13:95839600-95857800 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr13:95840400-95874400 Weak transcription Pancreas Pancrea
24 chr13:95841800-95854200 Weak transcription HUVEC blood vessel
25 chr13:95842000-95855600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr13:95842000-95856000 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr13:95842000-95857800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr13:95842000-95864800 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr13:95842000-95869000 Weak transcription Fetal Kidney kidney
30 chr13:95842200-95898200 Weak transcription NHDF-Ad bronchial
31 chr13:95844000-95848200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr13:95844400-95847800 Enhancers Skeletal Muscle Male skeletal muscle
33 chr13:95844400-95848000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr13:95844400-95864400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr13:95844400-95865600 Weak transcription Spleen Spleen
36 chr13:95844400-95867600 Weak transcription Rectal Smooth Muscle rectum
37 chr13:95844600-95858400 Weak transcription HSMM muscle
38 chr13:95844600-95863600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr13:95844800-95847400 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr13:95844800-95848200 Strong transcription GM12878-XiMat blood
41 chr13:95845000-95857000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr13:95845200-95847800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr13:95845200-95848000 Enhancers Cortex derived primary cultured neurospheres brain
44 chr13:95845200-95848600 Strong transcription Rectal Mucosa Donor 29 rectum
45 chr13:95845400-95847800 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr13:95845400-95847800 Genic enhancers A549 lung
47 chr13:95845600-95847400 Weak transcription Ovary ovary
48 chr13:95846000-95871400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr13:95846200-95847600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
50 chr13:95846200-95858400 Weak transcription HepG2 liver

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Last update: Aug 31, 2015