The 2.0 version of rSNPBase

Variant report

Variant rs1680647
Chromosome Location chr1:145656575-145656576
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145634600-145673000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:145634800-145682600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr1:145638600-145666600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:145638800-145666400 Weak transcription Spleen Spleen
5 chr1:145639400-145672600 Weak transcription Colonic Mucosa Colon
6 chr1:145640000-145666400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:145640200-145663000 Weak transcription Placenta Placenta
8 chr1:145641600-145663200 Weak transcription Brain Cingulate Gyrus brain
9 chr1:145641600-145666600 Weak transcription Brain Germinal Matrix brain
10 chr1:145642400-145682600 Weak transcription Placenta Amnion Placenta Amnion
11 chr1:145643000-145663200 Weak transcription Lung lung
12 chr1:145643800-145672600 Weak transcription Brain Substantia Nigra brain
13 chr1:145644600-145656600 Weak transcription K562 blood
14 chr1:145644600-145662800 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr1:145645000-145672000 Weak transcription Fetal Kidney kidney
16 chr1:145645400-145668600 Weak transcription H9 Cell Line embryonic stem cell
17 chr1:145646600-145666200 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr1:145646600-145666400 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:145646800-145663200 Weak transcription Brain Hippocampus Middle brain
20 chr1:145648600-145660800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr1:145648600-145663200 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:145648600-145663200 Weak transcription Fetal Brain Female brain
23 chr1:145649000-145682800 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr1:145649200-145662600 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr1:145649200-145682400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr1:145649400-145663200 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr1:145649400-145663200 Weak transcription Fetal Lung lung
28 chr1:145649600-145660800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr1:145649600-145661000 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr1:145649600-145661000 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr1:145649600-145662000 Weak transcription Brain Inferior Temporal Lobe brain
32 chr1:145649600-145663200 Weak transcription Duodenum Mucosa Duodenum
33 chr1:145649600-145663200 Weak transcription Fetal Intestine Large intestine
34 chr1:145649600-145663200 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr1:145649600-145686600 Weak transcription Small Intestine intestine
36 chr1:145649800-145662600 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr1:145650600-145656800 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr1:145650600-145659800 Weak transcription Dnd41 blood
39 chr1:145650600-145663200 Weak transcription Fetal Thymus thymus
40 chr1:145651000-145660800 Weak transcription Primary hematopoietic stem cells blood
41 chr1:145651000-145666200 Weak transcription ES-WA7 Cell Line embryonic stem cell
42 chr1:145651400-145660800 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr1:145651600-145656800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:145651800-145663000 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr1:145652000-145659200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:145652600-145656600 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr1:145652600-145663200 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr1:145652800-145657400 Weak transcription Colon Smooth Muscle Colon
49 chr1:145652800-145659600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:145652800-145660800 Weak transcription HSMM muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015