Variant report

Variant rs16827074
Chromosome Location chr1:145588777-145588778
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145576600-145588800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:145577000-145588800 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:145579400-145588800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr1:145584600-145591400 Weak transcription Small Intestine intestine
5 chr1:145584800-145588800 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:145585000-145588800 Weak transcription Aorta Aorta
7 chr1:145585800-145588800 Weak transcription Ovary ovary
8 chr1:145585800-145588800 Weak transcription Pancreas Pancrea
9 chr1:145585800-145588800 Weak transcription Psoas Muscle Psoas
10 chr1:145586400-145588800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr1:145586600-145588800 Weak transcription Liver Liver
12 chr1:145586600-145588800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr1:145587000-145588800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:145587000-145588800 Weak transcription Brain Cingulate Gyrus brain
15 chr1:145587000-145588800 Weak transcription Left Ventricle heart
16 chr1:145587200-145588800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr1:145587200-145588800 Weak transcription Brain Hippocampus Middle brain
18 chr1:145587200-145588800 Weak transcription Fetal Lung lung
19 chr1:145587400-145588800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:145587400-145588800 Weak transcription Fetal Intestine Large intestine
21 chr1:145587400-145588800 Weak transcription NHEK skin
22 chr1:145587600-145588800 Weak transcription Muscle Satellite Cultured Cells --
23 chr1:145587600-145588800 Weak transcription Fetal Brain Female brain
24 chr1:145587600-145588800 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr1:145587800-145588800 Weak transcription Brain Germinal Matrix brain
26 chr1:145587800-145588800 Weak transcription Lung lung
27 chr1:145587800-145588800 Weak transcription Thymus Thymus
28 chr1:145588200-145588800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:145588200-145588800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
30 chr1:145588200-145588800 Enhancers Primary B cells from peripheral blood blood
31 chr1:145588200-145589000 Enhancers HSMMtube muscle
32 chr1:145588200-145589800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:145588400-145588800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:145588400-145588800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:145588400-145588800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr1:145588400-145588800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
37 chr1:145588400-145588800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
38 chr1:145588400-145588800 Enhancers Primary T helper naive cells from peripheral blood blood
39 chr1:145588400-145588800 Enhancers Primary T helper cells PMA-I stimulated --
40 chr1:145588400-145588800 Enhancers Primary T helper cells fromperipheralblood blood
41 chr1:145588400-145588800 Active TSS Primary T regulatory cells fromperipheralblood blood
42 chr1:145588400-145588800 Enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr1:145588400-145588800 Enhancers Primary T killer naive cells fromperipheralblood blood
44 chr1:145588400-145588800 Enhancers Cortex derived primary cultured neurospheres brain
45 chr1:145588400-145588800 Weak transcription Fetal Muscle Leg muscle
46 chr1:145588400-145588800 Enhancers Placenta Placenta
47 chr1:145588400-145588800 Genic enhancers Fetal Stomach stomach
48 chr1:145588400-145588800 Enhancers Fetal Thymus thymus
49 chr1:145588400-145588800 Enhancers Stomach Mucosa stomach
50 chr1:145588400-145589000 Enhancers Spleen Spleen

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