Variant report

Variant	rs16827528
Chromosome Location	chr3:157078151-157078152
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11919151	0.85[CEU][hapmap];0.83[CHD][hapmap];0.87[JPT][hapmap]
rs13064292	0.85[CEU][hapmap]
rs13325944	0.88[MEX][hapmap]
rs66928005	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7632367	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9845182	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9849526	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157066000-157086800	Weak transcription	Pancreas	Pancrea
2	chr3:157066600-157083200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr3:157073400-157079800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr3:157075800-157078600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr3:157075800-157078800	Enhancers	NHEK	skin
6	chr3:157076000-157078800	Enhancers	NH-A	brain
7	chr3:157076400-157079600	Enhancers	Osteobl	bone
8	chr3:157076600-157078800	Enhancers	NHLF	lung
9	chr3:157076600-157079000	Enhancers	Hela-S3	cervix
10	chr3:157076600-157079600	Enhancers	NHDF-Ad	bronchial
11	chr3:157076800-157079400	Enhancers	HSMM	muscle
12	chr3:157077000-157078600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr3:157077200-157078200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr3:157077200-157078600	Flanking Active TSS	A549	lung
15	chr3:157077200-157079400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr3:157077200-157081000	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr3:157077600-157083400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr3:157077800-157078200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr3:157077800-157078200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr3:157077800-157078200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr3:157077800-157078200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr3:157077800-157078200	Enhancers	Muscle Satellite Cultured Cells	--
23	chr3:157077800-157078400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr3:157077800-157078800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr3:157078000-157078200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
26	chr3:157078000-157078200	Enhancers	HUVEC	blood vessel

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