The 2.0 version of rSNPBase

Variant report

Variant rs16834867
Chromosome Location chr1:192782261-192782262
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:192779000-192784800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:192779200-192783000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:192779200-192783800 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr1:192779400-192782800 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr1:192779400-192790800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr1:192779600-192782600 Weak transcription Placenta Placenta
7 chr1:192779600-192782600 Weak transcription Lung lung
8 chr1:192779600-192783400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr1:192779600-192793200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr1:192779800-192782600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr1:192779800-192782600 Weak transcription Right Ventricle heart
12 chr1:192779800-192782800 Weak transcription Spleen Spleen
13 chr1:192779800-192783600 Weak transcription NHEK skin
14 chr1:192779800-192784800 Weak transcription Ovary ovary
15 chr1:192779800-192786400 Weak transcription Small Intestine intestine
16 chr1:192780000-192784200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:192780200-192782400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:192780600-192782600 Active TSS Primary B cells from cord blood blood
19 chr1:192780800-192786000 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr1:192781000-192782600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr1:192781000-192782800 Weak transcription Pancreas Pancrea
22 chr1:192781000-192783400 Weak transcription HMEC breast
23 chr1:192781000-192795000 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:192781200-192782400 Weak transcription HSMMtube muscle
25 chr1:192781200-192782600 Weak transcription Brain Cingulate Gyrus brain
26 chr1:192781200-192782600 Weak transcription Fetal Muscle Trunk muscle
27 chr1:192781200-192782800 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr1:192781200-192783400 Weak transcription H1 Cell Line embryonic stem cell
29 chr1:192781200-192783600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:192781200-192783800 Weak transcription A549 lung
31 chr1:192781200-192784200 Weak transcription H9 Cell Line embryonic stem cell
32 chr1:192781200-192784200 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr1:192781200-192784400 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr1:192781200-192784400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:192781200-192791200 Weak transcription Fetal Brain Male brain
36 chr1:192781400-192782400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:192781400-192782600 Weak transcription Fetal Kidney kidney
38 chr1:192781400-192782800 Weak transcription Fetal Muscle Leg muscle
39 chr1:192781400-192783000 Weak transcription Left Ventricle heart
40 chr1:192781400-192783000 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr1:192781400-192783200 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr1:192781400-192783600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr1:192781400-192783600 Weak transcription Adipose Nuclei Adipose
44 chr1:192781400-192783600 Weak transcription HSMM muscle
45 chr1:192781400-192783800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr1:192781400-192783800 Weak transcription NH-A brain
47 chr1:192781400-192784400 Weak transcription Muscle Satellite Cultured Cells --
48 chr1:192781400-192785200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:192781400-192785600 Weak transcription HUVEC blood vessel
50 chr1:192781400-192786400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015