Variant report

Variant	rs1684237
Chromosome Location	chr3:99906444-99906445
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817478	chr3:99474086-99955548	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
2	nsv916476	chr3:99478229-100124625	Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
3	nsv523836	chr3:99906250-99906751	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:99899000-99907800	Weak transcription	Psoas Muscle	Psoas
2	chr3:99899000-99911000	Weak transcription	Aorta	Aorta
3	chr3:99905000-99906800	Weak transcription	Fetal Stomach	stomach
4	chr3:99905000-99907400	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr3:99905000-99907800	Weak transcription	Left Ventricle	heart
6	chr3:99905400-99908600	Weak transcription	Placenta	Placenta
7	chr3:99905600-99906800	Weak transcription	HepG2	liver
8	chr3:99905600-99908000	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr3:99905600-99910400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr3:99905600-99910400	Weak transcription	Fetal Muscle Leg	muscle
11	chr3:99905800-99907800	Weak transcription	K562	blood
12	chr3:99905800-99910600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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