The 2.0 version of rSNPBase

Variant report

Variant rs16844326
Chromosome Location chr3:136678385-136678386
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:136656400-136681400 Weak transcription Fetal Muscle Leg muscle
2 chr3:136658600-136679400 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr3:136662800-136678800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr3:136665200-136680200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr3:136665400-136679000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr3:136665400-136680200 Weak transcription Primary T cells fromperipheralblood blood
7 chr3:136665400-136680200 Weak transcription Fetal Muscle Trunk muscle
8 chr3:136665600-136680000 Weak transcription Dnd41 blood
9 chr3:136665600-136689400 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr3:136666600-136680400 Weak transcription Left Ventricle heart
11 chr3:136669400-136680200 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr3:136673800-136680400 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr3:136674000-136680200 Weak transcription Fetal Thymus thymus
14 chr3:136674200-136679800 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr3:136674200-136680200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr3:136674600-136680000 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr3:136674800-136680200 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr3:136675000-136679800 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr3:136675600-136679400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr3:136675600-136679600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr3:136675600-136679800 Weak transcription Osteobl bone
22 chr3:136675600-136681200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr3:136675800-136679600 Weak transcription HSMM muscle
24 chr3:136676000-136678600 Weak transcription Small Intestine intestine
25 chr3:136676200-136679600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr3:136676200-136680200 Weak transcription HepG2 liver
27 chr3:136676400-136679400 Weak transcription Muscle Satellite Cultured Cells --
28 chr3:136677000-136679400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr3:136677000-136679600 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr3:136677000-136679600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr3:136677000-136679800 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr3:136677000-136679800 Weak transcription NHLF lung
33 chr3:136677200-136678800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr3:136677200-136679400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr3:136677200-136679600 Transcr. at gene 5' and 3' NHEK skin
36 chr3:136677200-136680600 Enhancers NHDF-Ad bronchial
37 chr3:136677400-136678800 Transcr. at gene 5' and 3' HMEC breast
38 chr3:136677400-136679400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr3:136677600-136678800 Active TSS Esophagus oesophagus
40 chr3:136677800-136679800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr3:136677800-136679800 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr3:136678000-136678800 Flanking Active TSS Hela-S3 cervix
43 chr3:136678200-136678800 Transcr. at gene 5' and 3' Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr3:136678200-136678800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr3:136678200-136679200 Weak transcription A549 lung

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Last update: Aug 31, 2015