Variant report

Variant	rs16844869
Chromosome Location	chr1:172632751-172632752
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:172631982..172633904-chr1:172646392..172648662,2	MCF-7	breast:
2	chr1:172626517..172628084-chr1:172631691..172634350,2	K562	blood:

rs_ID	r²[population]
rs16844895	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16844897	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172624200-172640600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr1:172626800-172632800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
3	chr1:172628800-172639400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr1:172631200-172632800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr1:172631200-172633000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr1:172631200-172633200	Enhancers	HMEC	breast
7	chr1:172631400-172632800	Flanking Active TSS	Primary T cells fromperipheralblood	blood
8	chr1:172631600-172632800	Enhancers	Primary hematopoietic stem cells short term culture	blood
9	chr1:172631600-172632800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr1:172631600-172633200	Enhancers	NHEK	skin
11	chr1:172631800-172632800	Enhancers	Muscle Satellite Cultured Cells	--
12	chr1:172631800-172633000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr1:172631800-172633000	Enhancers	NH-A	brain
14	chr1:172631800-172633000	Enhancers	Osteobl	bone
15	chr1:172631800-172633200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr1:172632000-172632800	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
17	chr1:172632000-172633000	Enhancers	Dnd41	blood
18	chr1:172632000-172633200	Enhancers	Hela-S3	cervix
19	chr1:172632000-172640400	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr1:172632200-172633200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
21	chr1:172632200-172633200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
22	chr1:172632400-172633000	Enhancers	Primary T cells from cord blood	blood
23	chr1:172632400-172633000	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
24	chr1:172632400-172633000	Enhancers	K562	blood
25	chr1:172632400-172633200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr1:172632400-172633200	Enhancers	Primary T helper cells fromperipheralblood	blood
27	chr1:172632400-172633800	Enhancers	Primary T helper naive cells from peripheral blood	blood
28	chr1:172632400-172633800	Enhancers	Primary T killer memory cells from peripheral blood	blood
29	chr1:172632400-172634800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
30	chr1:172632600-172632800	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
31	chr1:172632600-172633000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr1:172632600-172634400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood

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