Variant report

Variant	rs16851133
Chromosome Location	chr4:75259538-75259539
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:75236693..75239606-chr4:75255900..75260802,4	K562	blood:
2	chr4:75259488..75265859-chr4:75266345..75272379,9	K562	blood:
3	chr4:75255673..75259662-chr4:75261453..75263422,4	K562	blood:
4	chr4:75258039..75260988-chr4:75266177..75268668,2	K562	blood:
5	chr4:75246746..75251760-chr4:75253733..75260559,8	MCF-7	breast:
6	chr17:57932165..57934670-chr4:75258637..75260729,2	MCF-7	breast:
7	chr4:75247057..75249618-chr4:75259212..75262953,3	K562	blood:
8	chr4:75193289..75195375-chr4:75259120..75261620,2	K562	blood:

No data

No data

No data

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs10518119	1.00[MEX][hapmap]
rs4694665	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv525980	chr4:74731526-75382209	Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
2	nsv1009099	chr4:75089233-75726206	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:75241400-75260200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr4:75252000-75260200	Weak transcription	K562	blood
3	chr4:75252400-75263600	Weak transcription	NHEK	skin
4	chr4:75253000-75261400	Weak transcription	Fetal Intestine Large	intestine
5	chr4:75253200-75263200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr4:75253600-75263000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr4:75255400-75263600	Weak transcription	A549	lung
8	chr4:75255600-75260400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr4:75256600-75260400	Weak transcription	Hela-S3	cervix
10	chr4:75258000-75263600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
11	chr4:75258200-75260600	Weak transcription	HMEC	breast
12	chr4:75258600-75260400	Weak transcription	HUVEC	blood vessel

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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