Variant report

rSNPs within LD-proxies of this variant (count:10)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833392	chr2:11054580-11235239	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv580971	chr2:11175395-11226507	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

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Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:11195400-11198400	Weak transcription	Spleen	Spleen
2	chr2:11196200-11197600	Enhancers	HSMMtube	muscle
3	chr2:11196600-11197200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr2:11196600-11197200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr2:11196600-11197200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr2:11196600-11197200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr2:11196600-11197200	Enhancers	HMEC	breast
8	chr2:11196600-11197400	Enhancers	Osteobl	bone
9	chr2:11196600-11197600	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr2:11196600-11197600	Enhancers	NH-A	brain
11	chr2:11196600-11197800	Enhancers	Brain Germinal Matrix	brain
12	chr2:11196600-11197800	Enhancers	Fetal Brain Male	brain
13	chr2:11196800-11197200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr2:11196800-11197200	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr2:11196800-11197200	Enhancers	Brain Anterior Caudate	brain
16	chr2:11196800-11197200	Enhancers	Brain Cingulate Gyrus	brain
17	chr2:11196800-11197600	Enhancers	Fetal Brain Female	brain
18	chr2:11197000-11197200	Active TSS	Pancreatic Islets	Pancreatic Islet
19	chr2:11197000-11197200	Enhancers	NHEK	skin
20	chr2:11197000-11197800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr2:11197000-11197800	Enhancers	HSMM	muscle

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