Variant report

Variant	rs16862991
Chromosome Location	chr3:150608064-150608065
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs13074953	1.00[ASN][1000 genomes]
rs13075078	1.00[ASN][1000 genomes]
rs13079392	1.00[ASN][1000 genomes]
rs34204678	1.00[ASN][1000 genomes]
rs34741729	1.00[ASN][1000 genomes]
rs4234293	1.00[ASN][1000 genomes]
rs4680029	1.00[ASN][1000 genomes]
rs569140	1.00[ASN][1000 genomes]
rs569220	1.00[ASN][1000 genomes]
rs59741456	1.00[ASN][1000 genomes]
rs61360663	1.00[ASN][1000 genomes]
rs7619908	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532662	chr3:150180747-150633414	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	101 gene(s)	inside rSNPs	diseases
2	nsv877646	chr3:150582992-150641304	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	n/a
3	nsv915879	chr3:150607390-150860207	Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:150605400-150610400	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr3:150605600-150608600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr3:150606200-150610200	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
4	chr3:150606200-150611400	Enhancers	Placenta	Placenta
5	chr3:150606400-150609200	Enhancers	Primary hematopoietic stem cells	blood
6	chr3:150606400-150609200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
7	chr3:150607000-150609200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr3:150607400-150609000	Enhancers	Primary hematopoietic stem cells short term culture	blood
9	chr3:150607400-150610400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr3:150607800-150610000	Active TSS	Primary B cells from cord blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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