Variant report

Variant	rs16865960
Chromosome Location	chr2:7258756-7258757
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915888	chr2:7197783-7461967	Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	esv1849765	chr2:7244036-7267069	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:7238000-7259000	Weak transcription	Brain Anterior Caudate	brain
2	chr2:7238000-7259600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr2:7238000-7260400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
4	chr2:7238200-7258800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr2:7246600-7266400	Weak transcription	Primary T cells from cord blood	blood
6	chr2:7250400-7259600	Weak transcription	Fetal Kidney	kidney
7	chr2:7255200-7260400	Enhancers	Fetal Brain Female	brain
8	chr2:7257200-7261200	Weak transcription	Dnd41	blood
9	chr2:7258600-7259800	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr2:7258600-7260400	Enhancers	Fetal Brain Male	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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