Variant report

Variant	rs16869751
Chromosome Location	chr4:20544756-20544757
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs3796640	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829875	chr4:20502895-20680956	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	89 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:20492000-20599800	Weak transcription	Aorta	Aorta
2	chr4:20511800-20576200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr4:20519400-20571000	Weak transcription	Adipose Nuclei	Adipose
4	chr4:20524200-20555200	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr4:20525200-20555400	Weak transcription	Stomach Smooth Muscle	stomach
6	chr4:20530000-20546400	Weak transcription	Pancreas	Pancrea
7	chr4:20530400-20555400	Weak transcription	NHEK	skin
8	chr4:20533000-20578000	Weak transcription	NHLF	lung
9	chr4:20533800-20576200	Weak transcription	Left Ventricle	heart
10	chr4:20534600-20552800	Weak transcription	Brain Anterior Caudate	brain
11	chr4:20534800-20576400	Weak transcription	Fetal Brain Male	brain
12	chr4:20535800-20593600	Weak transcription	Fetal Kidney	kidney
13	chr4:20536000-20548600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr4:20536000-20552400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr4:20536000-20554800	Weak transcription	Muscle Satellite Cultured Cells	--
16	chr4:20536000-20555200	Weak transcription	Fetal Muscle Trunk	muscle
17	chr4:20536600-20572200	Weak transcription	Placenta	Placenta
18	chr4:20536800-20618600	Weak transcription	Spleen	Spleen
19	chr4:20537800-20552600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr4:20537800-20552600	Weak transcription	Colon Smooth Muscle	Colon
21	chr4:20537800-20552800	Weak transcription	Duodenum Smooth Muscle	Duodenum
22	chr4:20538000-20553200	Weak transcription	Fetal Stomach	stomach
23	chr4:20539000-20552800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr4:20540400-20545200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr4:20541200-20546800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr4:20541200-20552800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
27	chr4:20543600-20549600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr4:20543600-20549800	Weak transcription	Placenta Amnion	Placenta Amnion
29	chr4:20543800-20545200	Strong transcription	Fetal Lung	lung
30	chr4:20544000-20545000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr4:20544200-20544800	Strong transcription	NHDF-Ad	bronchial
32	chr4:20544200-20545000	Enhancers	Osteobl	bone
33	chr4:20544600-20545000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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