Variant report

Variant rs1688285
Chromosome Location chr3:111762115-111762116
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111754400-111762600 Weak transcription Fetal Heart heart
2 chr3:111756200-111763200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
3 chr3:111757600-111767800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr3:111758000-111762400 Weak transcription HMEC breast
5 chr3:111758200-111763000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr3:111758400-111762200 Weak transcription NHEK skin
7 chr3:111759200-111762400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
8 chr3:111759400-111762400 Weak transcription Fetal Thymus thymus
9 chr3:111759600-111762800 Weak transcription Thymus Thymus
10 chr3:111759800-111762600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr3:111760200-111762600 Enhancers Cortex derived primary cultured neurospheres brain
12 chr3:111760600-111762400 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr3:111760600-111766600 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr3:111760600-111767600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr3:111760600-111767600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr3:111760800-111762400 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr3:111761000-111762400 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr3:111761000-111762400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr3:111761000-111762400 Enhancers Pancreatic Islets Pancreatic Islet
20 chr3:111761400-111763200 Enhancers Stomach Mucosa stomach
21 chr3:111761600-111762200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr3:111761600-111762200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
23 chr3:111761600-111762200 Enhancers Brain Anterior Caudate brain
24 chr3:111761600-111762200 Enhancers Brain Hippocampus Middle brain
25 chr3:111761600-111762200 Enhancers Fetal Intestine Small intestine
26 chr3:111761600-111762600 Enhancers Brain Substantia Nigra brain
27 chr3:111761600-111762600 Enhancers Rectal Mucosa Donor 31 rectum
28 chr3:111761600-111762800 Enhancers Fetal Brain Female brain
29 chr3:111761600-111763000 Enhancers Brain Cingulate Gyrus brain
30 chr3:111761800-111762200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr3:111761800-111762400 Enhancers A549 lung
32 chr3:111761800-111762400 Enhancers HepG2 liver
33 chr3:111761800-111762600 Enhancers iPS-15b Cell Line embryonic stem cell
34 chr3:111762000-111762200 Flanking Active TSS Brain Inferior Temporal Lobe brain
35 chr3:111762000-111762200 Enhancers Gastric stomach
36 chr3:111762000-111762400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr3:111762000-111762400 Enhancers Adipose Nuclei Adipose
38 chr3:111762000-111762400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
39 chr3:111762000-111762600 Enhancers Fetal Intestine Large intestine
40 chr3:111762000-111763000 Active TSS Brain Angular Gyrus brain

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