Variant report

Variant rs16887874
Chromosome Location chr6:56269517-56269518
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56253000-56282600 Weak transcription Aorta Aorta
2 chr6:56265200-56270000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr6:56265200-56270200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr6:56265200-56271200 Weak transcription Stomach Mucosa stomach
5 chr6:56265400-56270000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr6:56265400-56270000 Weak transcription Gastric stomach
7 chr6:56267200-56271800 Enhancers HepG2 liver
8 chr6:56267800-56270000 Enhancers Colon Smooth Muscle Colon
9 chr6:56268000-56270400 Enhancers Rectal Smooth Muscle rectum
10 chr6:56268200-56270000 Enhancers Skeletal Muscle Female skeletal muscle
11 chr6:56268400-56269600 Enhancers HSMMtube muscle
12 chr6:56268400-56269800 Enhancers Duodenum Smooth Muscle Duodenum
13 chr6:56268400-56270000 Enhancers Fetal Lung lung
14 chr6:56268400-56270400 Enhancers Liver Liver
15 chr6:56268400-56270400 Enhancers Fetal Stomach stomach
16 chr6:56268400-56271400 Enhancers Pancreatic Islets Pancreatic Islet
17 chr6:56268600-56269600 Enhancers Fetal Adrenal Gland Adrenal Gland
18 chr6:56268600-56269600 Enhancers NHDF-Ad bronchial
19 chr6:56268600-56271600 Enhancers Hela-S3 cervix
20 chr6:56268800-56270200 Weak transcription Small Intestine intestine
21 chr6:56269000-56270000 Weak transcription Ovary ovary
22 chr6:56269000-56270000 Weak transcription Psoas Muscle Psoas
23 chr6:56269000-56271400 Weak transcription Fetal Heart heart
24 chr6:56269200-56269600 Enhancers Muscle Satellite Cultured Cells --
25 chr6:56269200-56270000 Enhancers A549 lung
26 chr6:56269200-56270600 Enhancers Fetal Intestine Large intestine
27 chr6:56269200-56270600 Enhancers Fetal Intestine Small intestine
28 chr6:56269200-56272600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr6:56269400-56270400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr6:56269400-56270600 Enhancers Duodenum Mucosa Duodenum

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