Variant report
| Variant | rs16889392 |
|---|---|
| Chromosome Location | chr5:58518169-58518170 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:58474400-58520000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 2 | chr5:58485000-58518800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 3 | chr5:58485600-58518200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 4 | chr5:58490400-58519200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 5 | chr5:58506400-58518200 | Weak transcription | Left Ventricle | heart |
| 6 | chr5:58506400-58520400 | Weak transcription | Stomach Mucosa | stomach |
| 7 | chr5:58509200-58518400 | Weak transcription | Brain Hippocampus Middle | brain |
| 8 | chr5:58509400-58518800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 9 | chr5:58510400-58520000 | Weak transcription | Right Ventricle | heart |
| 10 | chr5:58511800-58521600 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 11 | chr5:58512800-58518200 | Weak transcription | Gastric | stomach |
| 12 | chr5:58512800-58518200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 13 | chr5:58512800-58532400 | Weak transcription | Pancreas | Pancrea |
| 14 | chr5:58514000-58518200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 15 | chr5:58514000-58518400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 16 | chr5:58514000-58518400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 17 | chr5:58514000-58518800 | Weak transcription | Fetal Intestine Large | intestine |
| 18 | chr5:58514200-58519200 | Weak transcription | Fetal Intestine Small | intestine |
| 19 | chr5:58514800-58518200 | Weak transcription | HUVEC | blood vessel |
| 20 | chr5:58516000-58519000 | Enhancers | A549 | lung |
| 21 | chr5:58516000-58530600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 22 | chr5:58516200-58518200 | Weak transcription | Fetal Kidney | kidney |
| 23 | chr5:58516200-58518200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 24 | chr5:58516200-58518800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 25 | chr5:58516200-58519200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 26 | chr5:58516200-58531000 | Weak transcription | Psoas Muscle | Psoas |
| 27 | chr5:58517200-58519600 | Enhancers | Placenta Amnion | Placenta Amnion |
| 28 | chr5:58517200-58519800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 29 | chr5:58517800-58518400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 30 | chr5:58517800-58518400 | Enhancers | Small Intestine | intestine |
| 31 | chr5:58517800-58519000 | Enhancers | Right Atrium | heart |
| 32 | chr5:58517800-58519400 | Enhancers | Fetal Muscle Leg | muscle |
| 33 | chr5:58517800-58520200 | Enhancers | Colon Smooth Muscle | Colon |
| 34 | chr5:58518000-58518400 | Enhancers | Fetal Heart | heart |
| 35 | chr5:58518000-58518400 | Genic enhancers | Hela-S3 | cervix |
| 36 | chr5:58518000-58518600 | Enhancers | HepG2 | liver |
| 37 | chr5:58518000-58519000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 38 | chr5:58518000-58520400 | Enhancers | Rectal Mucosa Donor 29 | rectum |
