The 2.0 version of rSNPBase

Variant report

Variant rs16890244
Chromosome Location chr6:37879731-37879732
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37850600-37890400 Weak transcription Primary B cells from cord blood blood
2 chr6:37851000-37884600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr6:37857600-37886000 Weak transcription Esophagus oesophagus
4 chr6:37857600-37895400 Weak transcription Pancreas Pancrea
5 chr6:37862400-37884000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr6:37862600-37882000 Weak transcription Fetal Intestine Small intestine
7 chr6:37864600-37880800 Weak transcription NHDF-Ad bronchial
8 chr6:37866000-37885600 Weak transcription Hela-S3 cervix
9 chr6:37872000-37887600 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr6:37872000-37888200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr6:37872000-37890400 Weak transcription Small Intestine intestine
12 chr6:37872200-37883000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr6:37872200-37884000 Weak transcription Adipose Nuclei Adipose
14 chr6:37872200-37884600 Weak transcription Fetal Kidney kidney
15 chr6:37872400-37883000 Weak transcription Brain Substantia Nigra brain
16 chr6:37872600-37885200 Weak transcription HepG2 liver
17 chr6:37872600-37896400 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr6:37872800-37880600 Weak transcription HMEC breast
19 chr6:37872800-37880800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr6:37873000-37882600 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr6:37873200-37887400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr6:37873400-37929200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr6:37874000-37888400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr6:37874200-37884600 Weak transcription A549 lung
25 chr6:37874400-37880800 Weak transcription Osteobl bone
26 chr6:37874400-37887600 Weak transcription Spleen Spleen
27 chr6:37874400-37888200 Weak transcription Primary B cells from peripheral blood blood
28 chr6:37874600-37880400 Weak transcription Muscle Satellite Cultured Cells --
29 chr6:37874600-37903800 Weak transcription Primary hematopoietic stem cells blood
30 chr6:37874800-37881600 Enhancers Primary T helper cells PMA-I stimulated --
31 chr6:37875000-37880600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr6:37875400-37880200 Enhancers Primary T killer naive cells fromperipheralblood blood
33 chr6:37876000-37880800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
34 chr6:37876600-37879800 Enhancers Primary T killer memory cells from peripheral blood blood
35 chr6:37876600-37880400 Enhancers Primary T helper cells fromperipheralblood blood
36 chr6:37876600-37903200 Weak transcription Dnd41 blood
37 chr6:37877200-37879800 Enhancers Primary T helper naive cells from peripheral blood blood
38 chr6:37877400-37880800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr6:37877600-37882800 Weak transcription Liver Liver
40 chr6:37877600-37884000 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr6:37877800-37880000 Enhancers Primary T regulatory cells fromperipheralblood blood
42 chr6:37877800-37881400 Enhancers Primary T cells from cord blood blood
43 chr6:37877800-37881800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr6:37878000-37883200 Weak transcription Primary T cells fromperipheralblood blood
45 chr6:37878000-37883200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr6:37878200-37879800 Weak transcription Stomach Mucosa stomach
47 chr6:37878200-37883400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr6:37878200-37883800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr6:37878400-37880200 Enhancers Colon Smooth Muscle Colon
50 chr6:37878800-37881200 Enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015