Variant report

Variant	rs16903293
Chromosome Location	chr5:36719593-36719594
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs6882061	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv492319	chr5:36570707-37061019	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv830263	chr5:36576504-36755093	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36700200-36724200	Weak transcription	Primary T cells from cord blood	blood
2	chr5:36705800-36724600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr5:36709200-36721800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr5:36710000-36721200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr5:36711800-36721000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr5:36712200-36721800	Weak transcription	Primary hematopoietic stem cells	blood
7	chr5:36714000-36723200	Weak transcription	Primary neutrophils fromperipheralblood	blood
8	chr5:36716400-36719600	Strong transcription	Monocytes-CD14+_RO01746	blood
9	chr5:36717000-36720200	Weak transcription	Primary B cells from peripheral blood	blood
10	chr5:36717200-36721600	Weak transcription	Primary monocytes fromperipheralblood	blood
11	chr5:36718600-36722400	Weak transcription	Fetal Heart	heart
12	chr5:36719000-36720400	Weak transcription	Primary B cells from cord blood	blood
13	chr5:36719200-36719600	Genic enhancers	GM12878-XiMat	blood
14	chr5:36719200-36720000	Enhancers	Fetal Lung	lung
15	chr5:36719400-36720000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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