Variant report

Variant	rs16904088
Chromosome Location	chr8:130498727-130498728
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs16904112	1.00[ASW][hapmap]
rs891834	1.00[YRI][hapmap]
rs9692742	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015611	chr8:130449321-130502086	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	esv3411472	chr8:130496920-130498968	Weak transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130490200-130503400	Weak transcription	Dnd41	blood
2	chr8:130495600-130499600	Genic enhancers	K562	blood
3	chr8:130497200-130504200	Weak transcription	Thymus	Thymus
4	chr8:130497600-130499000	Weak transcription	Fetal Muscle Leg	muscle
5	chr8:130497600-130500800	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr8:130497600-130501000	Weak transcription	Monocytes-CD14+_RO01746	blood
7	chr8:130497600-130503600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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