Variant report

Variant rs16906825
Chromosome Location chr9:93571975-93571976
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:93564600-93572000 Weak transcription Lung lung
2 chr9:93565000-93609000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr9:93565400-93577000 Weak transcription Colonic Mucosa Colon
4 chr9:93567000-93572800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr9:93567600-93573000 Weak transcription NHEK skin
6 chr9:93567800-93572000 Weak transcription Esophagus oesophagus
7 chr9:93567800-93572000 Weak transcription K562 blood
8 chr9:93567800-93572400 Weak transcription Stomach Mucosa stomach
9 chr9:93567800-93584800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr9:93567800-93584800 Weak transcription Fetal Intestine Large intestine
11 chr9:93567800-93597400 Weak transcription Gastric stomach
12 chr9:93568400-93575000 Enhancers Fetal Thymus thymus
13 chr9:93568400-93576600 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr9:93568600-93573600 Genic enhancers Primary B cells from peripheral blood blood
15 chr9:93569400-93573200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr9:93569600-93574600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr9:93570600-93572000 Flanking Active TSS GM12878-XiMat blood
18 chr9:93571000-93573000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
19 chr9:93571000-93575200 Strong transcription Fetal Intestine Small intestine
20 chr9:93571200-93572000 Enhancers Primary mononuclear cells fromperipheralblood Blood
21 chr9:93571200-93572400 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr9:93571200-93572400 Weak transcription Spleen Spleen
23 chr9:93571200-93572800 Genic enhancers Thymus Thymus
24 chr9:93571200-93574000 Weak transcription Pancreas Pancrea
25 chr9:93571200-93576200 Genic enhancers Primary monocytes fromperipheralblood blood
26 chr9:93571200-93576600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr9:93571400-93572200 Weak transcription Fetal Stomach stomach
28 chr9:93571400-93572600 Weak transcription HMEC breast
29 chr9:93571400-93572800 Genic enhancers Primary neutrophils fromperipheralblood blood
30 chr9:93571400-93576600 Weak transcription Small Intestine intestine
31 chr9:93571400-93576800 Weak transcription Primary T cells from cord blood blood
32 chr9:93571600-93572000 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
33 chr9:93571600-93572800 Enhancers Duodenum Mucosa Duodenum
34 chr9:93571600-93573000 Genic enhancers Primary hematopoietic stem cells blood
35 chr9:93571600-93575800 Genic enhancers Primary hematopoietic stem cells short term culture blood
36 chr9:93571800-93572400 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr9:93571800-93573200 Genic enhancers Primary B cells from cord blood blood
38 chr9:93571800-93573400 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr9:93571800-93577600 Weak transcription Fetal Kidney kidney

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