The 2.0 version of rSNPBase

Variant report

Variant rs16907021
Chromosome Location chr12:11833469-11833470
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11812200-11837400 Weak transcription Muscle Satellite Cultured Cells --
2 chr12:11815000-11836800 Weak transcription NHEK skin
3 chr12:11815000-11850600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr12:11815200-11833800 Weak transcription Colonic Mucosa Colon
5 chr12:11815200-11837800 Weak transcription NH-A brain
6 chr12:11820200-11841000 Weak transcription Fetal Intestine Small intestine
7 chr12:11822000-11850000 Weak transcription HMEC breast
8 chr12:11822200-11851000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr12:11826000-11837600 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr12:11826000-11837800 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr12:11826000-11838800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr12:11826000-11851200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr12:11826200-11838000 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr12:11826200-11839200 Weak transcription HepG2 liver
15 chr12:11827400-11834200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr12:11827400-11879800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr12:11827800-11851800 Weak transcription Ovary ovary
18 chr12:11828000-11833800 Weak transcription HSMM muscle
19 chr12:11828000-11834200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr12:11828000-11836800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr12:11828000-11837800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr12:11828600-11833600 Enhancers Fetal Heart heart
23 chr12:11828800-11836600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr12:11829000-11834200 Genic enhancers Fetal Thymus thymus
25 chr12:11829200-11837800 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr12:11829400-11836400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr12:11829400-11837000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr12:11829400-11840400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr12:11829400-11840600 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr12:11829400-11845000 Weak transcription Psoas Muscle Psoas
31 chr12:11829600-11835200 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr12:11829600-11835800 Weak transcription Fetal Intestine Large intestine
33 chr12:11829600-11837800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr12:11829600-11837800 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr12:11829600-11837800 Weak transcription Right Atrium heart
36 chr12:11829600-11838000 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr12:11829600-11839600 Weak transcription Placenta Placenta
38 chr12:11829800-11835800 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr12:11829800-11837800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr12:11829800-11839200 Weak transcription Fetal Stomach stomach
41 chr12:11830000-11839200 Weak transcription Liver Liver
42 chr12:11830200-11834000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
43 chr12:11830400-11836800 Weak transcription Adipose Nuclei Adipose
44 chr12:11830400-11840600 Weak transcription Fetal Kidney kidney
45 chr12:11830600-11834400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr12:11830600-11837800 Weak transcription Fetal Lung lung
47 chr12:11830600-11840800 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr12:11831000-11837000 Weak transcription Rectal Smooth Muscle rectum
49 chr12:11831000-11837800 Weak transcription Lung lung
50 chr12:11831000-11838800 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015