Variant report

Variant	rs16909435
Chromosome Location	chr10:58547388-58547389
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs16909437	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7923013	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:19 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427866	chr10:58448655-58548655	Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv551064	chr10:58457011-58702440	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv2758223	chr10:58490630-58689953	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv2759758	chr10:58490630-58689953	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv895506	chr10:58505135-58562422	Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv1049912	chr10:58512433-58549582	Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv551083	chr10:58512855-58559447	ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv895508	chr10:58512855-58562422	ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv551092	chr10:58515518-58551367	ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv528656	chr10:58515518-58557953	ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv467278	chr10:58515518-58557953	ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv551093	chr10:58515518-58557953	ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv470950	chr10:58515518-58559447	ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
14	nsv551094	chr10:58515518-58559447	ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
15	nsv551095	chr10:58516112-58562422	Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
16	nsv551098	chr10:58518278-58559447	ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
17	nsv1049948	chr10:58542054-58594031	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
18	nsv540651	chr10:58542054-58594031	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
19	nsv895509	chr10:58543768-58593295	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:58547000-58548000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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