Variant report

Variant	rs16915272
Chromosome Location	chr11:26118225-26118226
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11029120	1.00[AMR][1000 genomes]
rs11029184	0.84[AFR][1000 genomes]
rs11822944	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16915187	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16915247	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs977800	0.91[AFR][1000 genomes]
rs977801	0.91[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2760599	chr11:25186984-26159450	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26117600-26120000	Enhancers	Fetal Lung	lung
2	chr11:26118000-26118600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr11:26118200-26118600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr11:26118200-26118600	Flanking Active TSS	Fetal Brain Male	brain
5	chr11:26118200-26118800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr11:26118200-26119000	Enhancers	Fetal Kidney	kidney
7	chr11:26118200-26119000	Enhancers	Fetal Stomach	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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