Variant report

Variant	rs16922343
Chromosome Location	chr10:22751153-22751154
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10508645	0.87[AMR][1000 genomes]
rs11013000	1.00[ASW][hapmap];0.93[LWK][hapmap];0.86[MKK][hapmap];0.94[YRI][hapmap];0.93[AFR][1000 genomes]
rs11013006	0.87[AMR][1000 genomes]
rs11013008	0.87[AMR][1000 genomes]
rs11013014	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs12250466	0.93[AFR][1000 genomes]
rs12257373	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1418378	1.00[ASW][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.94[YRI][hapmap];0.93[AFR][1000 genomes]
rs61009557	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22743800-22752200	Weak transcription	Brain Hippocampus Middle	brain
2	chr10:22744000-22752400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr10:22748800-22752000	Weak transcription	GM12878-XiMat	blood
4	chr10:22750800-22751200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:22750800-22751200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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