Variant report

Variant rs169247
Chromosome Location chr6:5483234-5483235
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5434200-5487000 Weak transcription Aorta Aorta
2 chr6:5449000-5499400 Weak transcription Fetal Intestine Large intestine
3 chr6:5456400-5486000 Weak transcription Thymus Thymus
4 chr6:5457800-5487400 Weak transcription Fetal Intestine Small intestine
5 chr6:5459000-5486400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr6:5461600-5507200 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr6:5466400-5518200 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr6:5466600-5506400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr6:5466800-5502200 Weak transcription Gastric stomach
10 chr6:5467200-5487400 Weak transcription Lung lung
11 chr6:5468400-5487800 Weak transcription Primary B cells from cord blood blood
12 chr6:5471600-5487400 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr6:5471800-5489400 Weak transcription Small Intestine intestine
14 chr6:5471800-5505800 Weak transcription Primary B cells from peripheral blood blood
15 chr6:5472200-5487400 Weak transcription Primary T cells fromperipheralblood blood
16 chr6:5472400-5511600 Weak transcription Fetal Stomach stomach
17 chr6:5472600-5491800 Weak transcription Fetal Muscle Trunk muscle
18 chr6:5472600-5496800 Weak transcription NHDF-Ad bronchial
19 chr6:5472600-5499400 Weak transcription Spleen Spleen
20 chr6:5472600-5501800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr6:5472600-5506200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr6:5477800-5490000 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr6:5478000-5486800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr6:5479400-5487400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr6:5480200-5489200 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr6:5480200-5489400 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr6:5481200-5483600 Strong transcription Primary T cells from cord blood blood
28 chr6:5481400-5489200 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr6:5481400-5497600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr6:5481600-5483400 Enhancers Left Ventricle heart
31 chr6:5481600-5484200 Weak transcription Right Atrium heart
32 chr6:5481600-5486600 Weak transcription NHEK skin
33 chr6:5481600-5487400 Weak transcription Adipose Nuclei Adipose
34 chr6:5481600-5489400 Weak transcription Stomach Smooth Muscle stomach
35 chr6:5481600-5489600 Weak transcription Ovary ovary
36 chr6:5481600-5490400 Weak transcription Brain Germinal Matrix brain
37 chr6:5481600-5492200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr6:5481600-5493800 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr6:5481600-5496000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr6:5481600-5496800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr6:5481600-5499400 Weak transcription Right Ventricle heart
42 chr6:5481600-5499600 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr6:5481600-5500600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr6:5481800-5484800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr6:5481800-5486600 Weak transcription HMEC breast
46 chr6:5481800-5489400 Weak transcription Fetal Lung lung
47 chr6:5481800-5490400 Weak transcription Brain Inferior Temporal Lobe brain
48 chr6:5482000-5483400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr6:5482000-5483400 Enhancers Esophagus oesophagus
50 chr6:5482000-5499600 Weak transcription Brain Anterior Caudate brain

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