Variant report

Variant	rs16935103
Chromosome Location	chr8:69728662-69728663
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:69727322..69728935-chr8:69732801..69735089,2	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11985332	0.94[ASN][1000 genomes]
rs11992697	0.87[CHB][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs16935095	0.91[CHB][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs16935098	0.94[ASN][1000 genomes]
rs16935099	0.94[ASN][1000 genomes]
rs16935101	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16935104	0.94[ASN][1000 genomes]
rs16935106	0.94[ASN][1000 genomes]
rs16935109	0.94[ASN][1000 genomes]
rs16935110	0.91[CHB][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs16935115	0.92[ASN][1000 genomes]
rs16935118	0.92[ASN][1000 genomes]
rs16935120	0.92[ASN][1000 genomes]
rs16935125	0.92[ASN][1000 genomes]
rs16935127	0.92[ASN][1000 genomes]
rs16935129	0.92[ASN][1000 genomes]
rs16935130	0.92[ASN][1000 genomes]
rs4737917	0.92[ASN][1000 genomes]
rs4737918	0.92[ASN][1000 genomes]
rs56844352	0.92[ASN][1000 genomes]
rs57718595	0.90[ASN][1000 genomes]
rs59015729	0.92[ASN][1000 genomes]
rs60911031	0.92[ASN][1000 genomes]
rs73285468	0.94[ASN][1000 genomes]
rs73287482	0.91[ASN][1000 genomes]
rs7841945	0.92[ASN][1000 genomes]
rs7842053	0.92[ASN][1000 genomes]
rs7842094	0.92[ASN][1000 genomes]
rs9643597	0.92[ASN][1000 genomes]
rs9643598	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831349	chr8:69555461-69733515	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv465703	chr8:69641287-69814578	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv611462	chr8:69641287-69814578	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv1017131	chr8:69676989-69792515	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv1031642	chr8:69728620-69814849	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	nsv1033122	chr8:69728620-69843088	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69722600-69734200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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