The 2.0 version of rSNPBase

Variant report

Variant rs16937059
Chromosome Location chr8:49341541-49341542
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:49339200-49341800 Enhancers Fetal Brain Male brain
2 chr8:49339200-49341800 Enhancers Fetal Brain Female brain
3 chr8:49339200-49342600 Enhancers Fetal Muscle Trunk muscle
4 chr8:49339400-49341800 Enhancers Brain Substantia Nigra brain
5 chr8:49339400-49342600 Enhancers NHDF-Ad bronchial
6 chr8:49339400-49345000 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr8:49339400-49346400 Enhancers Fetal Muscle Leg muscle
8 chr8:49339600-49342600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
9 chr8:49339800-49341800 Enhancers Brain Angular Gyrus brain
10 chr8:49339800-49342600 Enhancers NHLF lung
11 chr8:49339800-49342600 Enhancers Osteobl bone
12 chr8:49339800-49344800 Enhancers Fetal Adrenal Gland Adrenal Gland
13 chr8:49340000-49342000 Enhancers Cortex derived primary cultured neurospheres brain
14 chr8:49340000-49342600 Enhancers Adipose Nuclei Adipose
15 chr8:49340000-49342800 Enhancers HUVEC blood vessel
16 chr8:49340000-49343000 Enhancers Skeletal Muscle Female skeletal muscle
17 chr8:49340000-49343000 Enhancers HSMM muscle
18 chr8:49340000-49343200 Enhancers Ovary ovary
19 chr8:49340000-49343400 Enhancers Colonic Mucosa Colon
20 chr8:49340000-49345000 Enhancers Brain Cingulate Gyrus brain
21 chr8:49340000-49345000 Enhancers Placenta Placenta
22 chr8:49340200-49343000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr8:49340200-49343200 Enhancers NH-A brain
24 chr8:49340200-49343600 Enhancers Fetal Heart heart
25 chr8:49340200-49344200 Enhancers Fetal Intestine Large intestine
26 chr8:49340200-49344400 Enhancers Rectal Mucosa Donor 31 rectum
27 chr8:49340200-49344600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr8:49340200-49345000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
29 chr8:49340400-49341600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr8:49340400-49341600 Weak transcription Esophagus oesophagus
31 chr8:49340400-49341600 Weak transcription Fetal Thymus thymus
32 chr8:49340400-49342400 Enhancers Rectal Mucosa Donor 29 rectum
33 chr8:49340400-49345000 Enhancers Duodenum Mucosa Duodenum
34 chr8:49340600-49341600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr8:49340600-49341600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr8:49340600-49341600 Weak transcription Gastric stomach
37 chr8:49340600-49341600 Weak transcription Psoas Muscle Psoas
38 chr8:49340600-49341600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr8:49340600-49344000 Weak transcription Aorta Aorta
40 chr8:49340600-49344800 Enhancers Fetal Stomach stomach
41 chr8:49340800-49341600 Enhancers HUES64 Cell Line embryonic stem cell
42 chr8:49340800-49341600 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr8:49340800-49344400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr8:49341000-49341800 Flanking Active TSS Brain Hippocampus Middle brain
45 chr8:49341000-49342800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr8:49341200-49341600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr8:49341200-49341600 Enhancers Brain Germinal Matrix brain
48 chr8:49341200-49341600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
49 chr8:49341200-49341800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr8:49341200-49341800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015