Variant report

Variant	rs16938614
Chromosome Location	chr8:49623824-49623825
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs16938753	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72640523	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72640526	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49612800-49626400	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr8:49618000-49626000	Weak transcription	Fetal Kidney	kidney
3	chr8:49618200-49628000	Weak transcription	Fetal Lung	lung
4	chr8:49619000-49626200	Weak transcription	Spleen	Spleen
5	chr8:49621600-49628600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr8:49622400-49625800	Weak transcription	Esophagus	oesophagus
7	chr8:49622400-49625800	Weak transcription	Placenta	Placenta
8	chr8:49622400-49628000	Weak transcription	Ovary	ovary
9	chr8:49622800-49627400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr8:49622800-49627600	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr8:49623000-49624000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr8:49623000-49624000	Enhancers	HMEC	breast
13	chr8:49623000-49626000	Enhancers	NHEK	skin
14	chr8:49623200-49624200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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