Variant report

Variant	rs16941690
Chromosome Location	chr15:60030662-60030663
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs16941689	1.00[MEX][hapmap];0.98[MKK][hapmap];0.92[YRI][hapmap];1.00[AMR][1000 genomes]
rs16941707	1.00[AMR][1000 genomes]
rs16941712	1.00[AMR][1000 genomes]
rs16941714	1.00[AMR][1000 genomes]
rs16941716	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7161850	1.00[MEX][hapmap]
rs8031397	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8031529	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv984219	chr15:60026752-60043941	Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:60030000-60034400	Enhancers	Liver	Liver
2	chr15:60030400-60030800	Enhancers	Pancreatic Islets	Pancreatic Islet
3	chr15:60030600-60033400	Enhancers	HepG2	liver

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links